Research Article
Computational Identification of Novel MicroRNAs and Their Targets in Vigna unguiculata
Table 2
The potential targets of newly identified miRNAs in Vigna unguiculata.
| | miRNA | Targeted gene | Targeted protein | Possible function | |
| | MIR156c/MIR157a | 190524055(1) | squamosa promoter-binding protein | transcription factor | UTR | | 190515614(0) | squamosa promoter-binding protein | transcription factor | ORF | | 190473822(0) | squamosa promoter-binding protein | transcription factor | UTR | | 190427748(1) | LIGULELESS1 protein | transcription factor | ORF | | MIR156j//MIR156g | 190416464(0) | rho-related protein racG | signal transduction | UTR | | MIR160b | 190447817(0) | auxin response factor | stress response | ORF | | MIR164 | 182656787(2) | NAC domain protein | transcription factor | ORF | | 182647558(3) | NAC domain protein | transcription factor | ORF | | MIR172b | 182399040(3) | protein kinase family protein | metabolism | ORF | | 190449132(3) | trehalose-6-phosphate synthase | metabolism | ORF | | MIR172c | 182652950(2) | transcription factor AHAP2 | transcription factor | ORF | | 182404391(2) | AP2 domain-containing transcription factor | transcription factor | ORF | | MIR172e | 190524349(3) | alpha/beta hydrolase | metabolism | ORF | | 190501430(2) | transcription factor APETALA2 | transcription factor | ORF | | 182389603(2) | protein AINTEGUMENTA, putative | transcription factor | ORF | | MIR319e/MIR319i | 190555544(3) | taxadien-5-alpha-ol O-acetyltransferase | metabolism | ORF | | 182406172(n) | 182402586(3) | ATP synthase alpha chain, mitochondrial | metabolism | UTR | | MIR319h | 190541283(3) | TCP family transcription factor | transcription factor | ORF | | MIR399b | 190527737(3) | delta-aminolevulinic acid dehydratase | metabolism | ORF | | 190504725(3) | 50S ribosomal protein L22, | metabolism | ORF | | 190478794(2) | arginine biosynthesis protein argJ 1ornithine acetyltransferase (OAT) family | metabolism | ORF | | 190452752(1) | cytochrome | metabolism | UTR | | 182643288(3) | aldehyde dehydrogenase | metabolism | ORF | | MIR2118 | 190540632(0) | cytoplasmic tRNA adenylyltransferase 1chromatin assembly factor 1 subunit p90 ATP-dependent RNA helicase DBP3 | translation | ORF |
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Parentheses indicate the number of mismatches between the miRNA and mRNA; ORF: open reading frame; UTR: untranslated region.
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