Repertoire of SSRs in the Castor Bean Genome and Their Utilization in Genetic Diversity Analysis in Jatropha curcas

Table 3

Extent of amplification and polymorphism among SSRs of varying repeat units in J. curcas.

Repeat units	SSRs tested (%)	SSRs with amplification (%)^1	Polymorphic SSRs (%)^2
10–15	11	3.00	1.89
16–20	13	12.26	3.31
21–25	14	18.20	6.16
26–30	26	20.20	3.31
31–35	22	9.00	1.89
36–40	8	3.20	0.47
>40	6	4.00	0.47

¹Percent amplification was calculated as: SSRs amplified from the corresponding repeat unit X100/total no. of SSRs tested for amplification from the corresponding repeat unit.
²Percent polymorphism was calculated as: SSRs polymorphic from the corresponding repeat unit X100/total no. of SSRs amplified from the corresponding repeat unit.