Table 1: Each of the four sets of transcript loci considered in our analysis. The numbers correspond to the loci before (all) or after (filtered) eliminating overlapping loci (Section 2). From each set, we considered up-, down-, or nonregulated transcript loci, each corresponding to 1/3 of the indicated numbers.

Transcript-loci setDescriptionPair 1-allPair 1-filtered Pair 2-allPair 2-filtered

HCG ICHigh CG promoter and intron-containing651019592964792
HCG ILHigh CG promoter and intron-less105272412
LCG ICLow CG promoter and intron-containing670517671980585
LCG ILLow CG promoter and intron-less84301515