Identification of Yellow Pigmentation Genes in Brassica rapa ssp. pekinensis Using Br300 Microarray

Table 2

Carotene and lutein synthesis-related genes.

Classification	Gene name	Br Chip ID	At locus	PI value		RT-PCR
				White	Yellow	W	Y
Alpha-, beta-carotene synthesis	BrPSY	Brapa_ESTC045764	At5g17230	2,591	8,978
	BrPDS	Brapa_ESTC002927	At4g14210	198	644
	BrCRTISO	Brapa_ESTC016346	At1g06820	199	565
	BrRUT2	Brapa_ESTC013530	At5g57030	172	522
Lutein and zeaxanthin synthesis	BrRUT1	Brapa_ESTC043629	At3g53130	956	1,544
	BrRUT5	Brapa_ESTC000882	At1g31800	173	444
	BrHYDB1	Brapa_ESTC013493	At4g25700	1,995	2,768
	BrHYDB2	Brapa_ESTC006182	At5g57030	1,044	4,856
Degradation	BrNCED3	Brapa_ESTC007729	At3g14440	1,848	1,622
	BrNCED4	Brapa_ESTC026102	At4g19170	8,361	4,453
	BrNCED6	Brapa_ESTC022333	At3g24220	113	106
Color	BrPAC1	Brapa_ESTC007240	At2g48120	4,656	1,719
	BrOR	Brapa_ESTC013943	At5g61670	901	702
	BrIM	Brapa_ESTC010363	At4g22260	1,285	1,523
	BrACT1