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International Journal of Genomics
Volume 2014, Article ID 267482, 21 pages
Research Article

Transcriptome of the Deep-Sea Black Scabbardfish, Aphanopus carbo (Perciformes: Trichiuridae): Tissue-Specific Expression Patterns and Candidate Genes Associated to Depth Adaptation

1ISSIA-CNR, Via de Marini 6, 16149 Genova, Italy
2LARSyS, Associated Laboratory & Centre of IMAR of the University of the Azores, Department of Oceanography and Fisheries, Rua Prof. Frederico Machado 4, 9901-862 Horta, Azores, Portugal
3School of Medicine, University of St Andrews, North Haugh, St Andrews KY16 9TF, UK
4Department of Life Sciences, University of Trieste, Piazzale Valmaura, 9, 34148 Trieste, Italy
5Institute of Marine Sciences, National Research Council (ISMAR-CNR), Castello 2437/F, 30122 Venezia, Italy

Received 25 May 2014; Accepted 19 July 2014; Published 17 September 2014

Academic Editor: Elena Pasyukova

Copyright © 2014 Sergio Stefanni et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

As supplementary material we included: amplification plots of all genes selected for this study in different tissue from Aphanopus carbo (Figure S1); a summary table of contig frequency in all tissues for those genes associated to depth not listed in Table 3 (Table S1); details on outputs related to the selection models for four teleost genes associated to depth (Table S2); values of Gibbs free energy calculations in terms of kinetic and thermodynamic quantities for all depth-related genes (Table S3); and the list of EST-SSR markers (Table S4).

  1. Supplementary Material