High-Throughput Sequencing Reveals Diverse Sets of Conserved, Nonconserved, and Species-Specific miRNAs in Jute

Table 4

Target genes for jute specific miRNAs.

miRNA name	Targets number	Target accession	Annotation	Location	Free energy
col-miRN1	1	GSVIVT01015521001	Pentatricopeptide repeat-containing protein, mitochondrial	2244, 2264	−47.30 [100.00%]
col-miRN4	2	GSVIVT01020089001	Thioredoxin H	16, 36	−25.50 [77.74%]
		GSVIVT01021522001	Protease degS	67, 87	−24.50 [74.47%]
col-miRN7	6	GSVIVT01000651001	Conserved gene of unknown function	178, 198	−13.30 [76.00%]
		GSVIVT01000655001	NB-ARC domain containing protein	1291, 1311	−13.30 [76.00%]
		GSVIVT01000657001	NB-ARC domain containing protein	1246, 1266	−13.20 [75.86%]
		GSVIVT01021549001	Conserved gene of unknown function	702, 722	−12.90 [75.00%]
		GSVIVT01035288001	Casein kinase	1464, 1484	−14.20 [81.14%]
		GSVIVT01000656001	NB-ARC domain containing protein	1300, 1320	−13.30 [76.00%]
col-miRN8	2	GSVIVT01033994001	26S proteasome regulatory particle non-ATPase subunit 8	835, 855	−30.70 [78.52%]
		GSVIVT01037657001	Aconitase	30, 043, 024	−29.30 [77.11%]