Research Article

RECORD: Reference-Assisted Genome Assembly for Closely Related Genomes

Table 1

Evaluation on simulated data.

Assembly TL (Mb) Error (in %) Id. Bases (Mb)

Contigs
  Velvet 18.20 213 b 0.85 18.05
  Amos 28.82 1834 b 2.09 28.22
  RECORD 25.81 2055 b 0.41 25.70
Edited reference
  Velvet 30.00 10 Mb 1.39 29.58
  Amos 30.00 10 Mb 1.03 29.69
  RECORD 30.00 10 Mb 0.59 29.82