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International Journal of Genomics
Volume 2016, Article ID 3654093, 10 pages
Research Article

Using Genome-Wide SNP Discovery and Genotyping to Reveal the Main Source of Population Differentiation in Nothofagus dombeyi (Mirb.) Oerst. in Chile

1Departamento de Silvicultura, Facultad de Ciencias Forestales, Universidad de Concepción, 4070386 Concepción, Chile
2Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, 4070386 Concepción, Chile
3Instituto de Ecología y Biodiversidad (IEB), Facultad de Ciencias, Universidad de Chile, 7800003 Santiago, Chile

Received 29 January 2016; Accepted 23 May 2016

Academic Editor: Ettore Randi

Copyright © 2016 Rodrigo Hasbún et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

The supplementary material contain information of distribution of sampling locations (Figure S1), and the read number by sample after demultiplexing step in GBS process (Figure S2). The supplementary information also contains the complete list of outlier SNP as putative candidates for adaptation and visualization of genetic relationships among samples by PCA (Figure S3) and neighbour-joining (NJ) tree (Figure S4). Lastly, the loadings of outliers SNPs showing the most contributing loci to PC1, PC2 y PC3 are given in Figure S5, S6 and S7, respectively.

  1. Supplementary Material