Research Article
De Novo Assembly and Comparative Transcriptome Analysis Provide Insight into Lysine Biosynthesis in Toona sinensis Roem
Table 1
Summary of de novo sequence assembly for Toona sinensis.
| | Assembly parameters | Transcripts | Unigenes |
| | Transcripts generated | 125,884 | 54,628 | | 200–500 bp | 45596 | 34113 | | 500–1 kb | 21690 | 8219 | | 1 kb-2 kb | 30384 | 7138 | | >2 kb | 28214 | 5158 | | N50 value (bp) | 2026 | 1505 | | Minimum length (bp) | 201 | 201 | | Mean length (bp) | 1290 | 764 | | Median length (bp) | 880 | 364 | | Maximum length (bp) | 18,462 | 18,462 | | N50 (bp) | 2133 | 1505 | | N90 (bp) | 579 | 277 | | Total nucleotides (bp) | 162,340,052 | 41,755,962 |
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