Transcriptome Analyses Reveal Lipid Metabolic Process in Liver Related to the Difference of Carcass Fat Content in Rainbow Trout (Oncorhynchus mykiss)

Table 1

The information of the primer pairs used to analyze gene expression by real-time quantitative RT-PCR.

Standard nomenclature	Primer	Product size (bp)
GSONMT00021034001	5′ CTGGGCACCACCTACTCAT 3′	110
	5′ GTGTCTGTGAAGGCAACG 3′
GSONMT00026574001	5′ AAACTGCTGGTGAAGACG 3′	136
	5′ TGTTGAGGACAAAGAGGG 3′
GSONMT00028411001	5′ CCCTGGGCGTACAGTTTGAC 3′	188
	5′ CTTGGCATCCACTCCATCGT 3′
GSONMT00029574001	5′ TTCAAGGGTCGTGGGAGA 3′	159
	5′ CGGAGGGTGTTGGAAGTG 3′
GSONMT00032762001	5′ AGCAGAACGGCAATGACT 3′	181
	5′ TCCTGGACGCTGGAGAAT 3′
GSONMT00051137001	5′ GGAGCCTGGTTGTGGATG 3′	286
	5′ GCTGTGGCCGTGGAGATA 3′
GSONMT00051158001	5′ CCTGGCTCTGTTTGTGGC 3′	137
	5′ TGTCGTCTGGGTGGTTGG 3′
GSONMT00054447001	5′ CTGGAGTAAAGATGGGTGAC 3′	169
	5′ GTCCTGTTCTGGGATTGG 3′
GSONMT00060652001	5′ CCGACCACCAACCCTAAT 3′	272
	5′ CACTGGCAGCGGTAGAAC 3′
GSONMT00062349001	5′ GCCTGGATGAGAATGA 3′	335
	5′ GATACCGCAGGACAAT 3′
GSONMT00064682001	5′ CCTACTGAGCCCATTCCT 3′	360
	5′ ATGGAGACTAAGCGAGGC 3′
GSONMT00070501001	5′ CGCCCACCTCTAAACAAGCC 3′	459
	5′ GCAGCGTCATCCAGCCCATC 3′
GSONMT00077785001	5′ CGTGCCCATCCGTTTCAATA 3′	137
	5′ CCCGAGCATCTTTGGTGTAG 3′
GSONMT00082167001	5′ ACCGTGGGAGTAGTTCTTGC 3′	425
	5′ TAGACACCGTTGTAGACCAG 3′
EF1	5′ TCCTCTTGGTCGTTTCGCTG 3′	159
	5′ ACCCGAGGGACATCCTGTG 3′

Note: the standard nomenclature for rainbow trout according to GBrowse-2.54 of rainbow trout genome project database.