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International Journal of Genomics
Volume 2017, Article ID 6542075, 11 pages
https://doi.org/10.1155/2017/6542075
Research Article

Comparative Proteomic Analysis of Paulownia fortunei Response to Phytoplasma Infection with Dimethyl Sulfate Treatment

1Institute of Paulownia, Henan Agricultural University, Zhengzhou, Henan 450002, China
2College of Forestry, Henan Agricultural University, Zhengzhou, Henan 450002, China

Correspondence should be addressed to Guoqiang Fan; moc.621@46xxlz

Received 17 February 2017; Revised 1 August 2017; Accepted 9 August 2017; Published 5 September 2017

Academic Editor: Marco Gerdol

Copyright © 2017 Zhen Wei et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

The information of supplementary materials are as follows: Supplementary Figure 1 The repeatability of two replicates. A: PF vs. PFI, B: PFI vs. PFI-15, C: PFI-15 vs. PFI-75, D: PF vs. PFI-75. The ratios of protein abundances for each protein in each comparison between biological replicates were calculated, and the “delta, error” in the absciss are presents the difference from the expected ratio of 1. Supplementary Figure 2 Gene Ontology (GO) analysis of proteins identified in P. fortunei. (A) Cellular component of GO. (B) Molecular function of GO. (C) Biological process of GO. Supplementary Figure 3 Cluster of Orthologous Groups (COG) function classification of proteins identified in P. fortunei. Supplementary Table 1: All proteins identified by iTRAQ in P. fortunei. Supplementary Table 2: KEGG annotation of the DAPs in PF vs. PFI. Supplementary table 3: GO analyses of the DAPs in PF vs. PFI. Supplementary table 4: Annotations of the 32 DMS-responsive DAPs. Supplementary Table 5: Statistics of 27 predicted PaWB-related proteins in P. fortunei. Supplementary Table 6: TOP 10 GO function analysis of DAPs in P. fortunei. Supplementary Table 7: KEGG pathway analysis of DAPs in P. fortunei. Supplemental Protocol 1: The program of SCX chromatography. Supplemental Protocol 2: The program of LC-MS/MS analysis. Supplemental Protocol 3: The parameters of Proteome Discoverer software.

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