International Journal of Genomics / 2017 / Article / Tab 3

Research Article

Preparing and Analyzing Expressed Sequence Tags (ESTs) Library for the Mammary Tissue of Local Turkish Kivircik Sheep

Table 3

The Blastn results of prenatal contigs.

Contig numberDescription Query coverageMax. ident.Length of contig (bp)The number of ESTs in the contig

Contig 1Bos taurus cDNA clone IMAGE: 794427756%92%7684
Contig 2Bos taurus ribosomal protein S25, mRNA (cDNA clone MGC: 127761, IMAGE: 7962930), complete cds45%92%11212
Contig 3Homo sapiens BAC clone RP11-67M24 from 4, complete sequence59%72%10492
Contig 4Bos taurus thymosin beta 4, X-linked, mRNA (cDNA clone MGC: 157367, IMAGE: 8260878), complete cds73%94%8602
Contig 5Equus caballus clathrin, light chain (Lca) (CLTA), mRNA > dbj|AB495091.1| Equus caballus clc mRNA for clathrin light chain, complete cds85%96%11932
Contig 6PREDICTED: Ovis aries elongation factor-1 alpha (LOC100125610), mRNA83%98%10835
Contig 7Ovis aries ribosomal protein S19 (RPS19), mRNA47%98%11714
Contig 8PREDICTED: Ovis aries solute carrier family 25 (aspartate/glutamate carrier), member 13 (SLC25A13), mRNA80%96%10492
Contig 9O. aries mRNA for immunoglobulin gamma-1 chain secreted form88%87%13942
Contig 10PREDICTED: Pantholops hodgsonii 60S ribosomal protein L32-like (LOC102314866), mRNA62%93%8422
Contig 11Bos taurus ribosomal protein L31 (RPL31), mRNA > gb|BC102125.1| Bos taurus ribosomal protein L31, mRNA (cDNA clone MGC: 127011, IMAGE: 7942112), complete cds47%92%10882
Contig 12Bos taurus ribosomal protein L13a (RPL13A), mRNA > gb|BC103039.1| Bos taurus ribosomal protein L13a, mRNA (cDNA clone MGC: 128198, IMAGE: 7984430), complete cds
Contig 13Bos taurus ribosomal protein S7 (RPS7), mRNA > gb|BC146133.1| Bos taurus ribosomal protein S7, mRNA (cDNA clone MGC: 165697, IMAGE: 8068046), complete cds68%93%10362
Contig 14Capra hircus serum amyloid A3 (LOC100860781), mRNA67%92%8754
Contig 15Capra hircus ribosomal protein S18 (RPS18) mRNA, complete cds73%95%7653
Contig 16Bos taurus progestagen-associated endometrial protein (PAEP), mRNA84%92%10324
Contig 17PREDICTED: Ovis aries ribosomal protein S11 (LOC100037666), mRNA49%94%11012
Contig 18Capra hircus ribosomal protein S18 (RPS18) mRNA, complete cds40%97%
Contig 19Bos taurus endothelial differentiation-related factor 1 (EDF1), mRNA > gb|BC102246.1| Bos taurus endothelial differentiation-related factor 1, mRNA (cDNA clone MGC: 127033,
IMAGE: 7942128), complete cds
Contig 20PREDICTED: Bubalus bubalis uncharacterized LOC102396380 (LOC102396380), misc_RNA64%83%8902
Contig 21Bos taurus ribosomal protein L11 (RPL11), mRNA > gb|BC102524.1| Bos taurus ribosomal protein L11, mRNA (cDNA clone MGC: 127967, IMAGE: 7956291), complete cds
Contig 22Bos taurus ribosomal protein L7a (RPL7A), mRNA46%87%10972
Contig 23Bos taurus apolipoprotein E, mRNA (cDNA clone MGC: 127905, IMAGE: 7962554), complete cds87%90%12883

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