Transcriptome Analysis of Rainbow Trout (Oncorhynchus mykiss) Eggs Subjected to the High Hydrostatic Pressure Treatment

Table 2

The top 10 transcripts with the lowest pointwise value () for the differences in the expression level between HHP-treated and untreated rainbow trout eggs. Downregulated transcripts are written in bold.

Transcript	Gene description	Base mean	Log2 fold change	lfcSE	Stat	value	adj	Treated1	Treated2	Treated3	Untreated1	Untreated2	Untreated3
C29972_c2_seq1_	Predicted: protein transport protein Sec31A-like (Oreochromis niloticus)	807.49	−2.19	0.76	−2.90	0.0037	1.0	1411.93	665.51	818.05	1073.05	793.53	82.86
C169673_c0_seq1_	Insulin-like growth factor 1b receptor (Oncorhynchus kisutch)	66.73	2.17	0.78	2.80	0.0051	1.0	7.43	48.60	60.68	49.72	35.99	197.95
C63960_c0_seq1_	Predicted: telomere-associated protein RIF1 (Oreochromis niloticus)	383.98	2.05	0.73	2.79	0.0053	1.0	95.54	414.58	360.60	230.52	352.88	849.79
C153473_c0_seq1_	IGF-I receptor subtype a (Cyprinus carpio)	123.58	2.13	0.77	2.78	0.0054	1.0	22.29	78.35	144.71	91.30	80.76	324.08
C9983_c0_seq1_	Predicted: FH1/FH2 domain-containing protein 3 (Danio rerio)	270.05	2.06	0.74	2.78	0.0055	1.0	50.96	325.32	240.40	163.62	313.37	526.63
C93043_c1_seq1_	MAM domain-containing glycosylphosphatidylinositol anchor protein 1 (Dicentrarchus labrax)	98.40	2.09	0.76	2.76	0.0058	1.0	11.68	104.14	114.36	89.50	93.05	177.69
C96308_c0_seq1_	Predicted: centromere protein F (Oreochromis niloticus)	1329.72	1.85	0.67	2.75	0.0059	1.0	406.59	1473.85	1256.84	1318.94	1195.56	2326.56
C35448_c1_seq1_	Predicted: FH1/FH2 domain-containing protein 3 (Oreochromis niloticus)	362.46	1.99	0.75	2.68	0.0075	1.0	77.50	404.66	374.60	158.20	419.59	740.23
C78059_c0_seq1_	Predicted: histone-lysine N-methyltransferase SETD2-like (Oreochromis niloticus)	606.50	2.04	0.76	2.67	0.0075	1.0	121.02	847.01	212.39	479.12	565.30	1414.17
C39441_c0_seq1_	Male-specific lethal 3-like 1 (Salmo salar) gb	217.77	−1.92	0.72	−2.66	0.0077	1.0	350.33	259.86	179.72	280.24	191.36	45.11