Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing

Table 3

Summary of nonredundant SNPs mapped to the 24 linkage groups by resequencing 20 greater amberjack genomes.

LGNo	The number of mutations in each LG	The number of mapped SNPs onto each LG
1	373,859	7831
2	375,132	7968
3	360,266	7933
4	334,990	7725
5	269,110	7413
6	311,326	7640
7	262,037	7763
8	309,899	7802
9	383,874	7980
10	310,587	7791
11	132,260	7172
12	285,525	7602
13	323,954	7722
14	227,417	7583
15	259,349	7763
16	267,369	7882
17	253,519	7833
18	280,457	7785
19	300,795	7878
20	312,122	7870
21	273,678	7831
22	220,279	7863
23	300,003	7800
24	331,264	7829
Total	7,059,071	186,259

LGNo indicates the linkage group number; the number of mutations in each LG indicates the number of mutations found in each linkage group; and the number of mapped SNPs onto linkage group indicates the number of SNPs ordered onto each linkage group.