Research Article

Molecular Sex Identification in the Hardy Rubber Tree (Eucommia ulmoides Oliver) via ddRAD Markers

Table 2

Putative male-specific ddRAD loci of Eucommia ulmoides predicted by bioinformatics analysis.

LocusddRAD sequences

MSL1PE read 1
GACCTAGGTACAGAAAATGTCCCCAATGAAATGAATGAAGTAGAAATATCAGCCGAAGCAGTGGAAGAGAAGATGTCAGATTGCCATGTGGATATGGAGACTGGTGTAGATGCTAACCCTAGTAACGGATCTGAA
PE read 2
GGTGTTCTAAATGAAGGTGTTGTTTTCTCCTCCGAAGTCTGTAGCAAGATAGAAGACTTTACAGTTAACGTGAAAACCCAACCTCAACAAGAGACAAGATAATCATCTTAGGTAATTTATACCCTCATGATAATA
MSL2PE read 1
GTCCTTAAAGTCCACGCATAGTCTTCACTTGTTTTTAGCCTTGGGTTCAATGACCAAGTTTGATATCCAATCCGTGAACTTCACCTTTTCTACTATATCGGACTTGATCAATTTGTTTATTTTTTCTTCAATGAT
PE read 2
GGGCACGGAGTACTAGAGCTCATGACCCTAGATTTTGAACCAGCATCGGTACCAATTAATAACCCTTGGGATGAAGAACCGACCCTCCTCCCTCATGAAGACCTTGTTAAAGTGTCCATCCACCCAACCATTAAG
MSL3PE read 1
GTCCTTCTCTGCATATTGACCGCCACGGCGGTGGTCTGGAAGCCTTAGCAGTAGGCTGCTTTTCAAAATTTGGCCCTTATGTTTGTTTTCTTATCGTTCTTCCACCATTCTTGATCTGATTTGATTGTTTATGAT
PE read 2
GGATTGGATTATTCACCAACAAAGCTCATAACTTAAACCATAAAGGTATAGGATATCCATATGTCAGATTGGGTTCCACTCTCCACTAATGTAGGCTTAGAAATTCAAAAAGATCAAAAGGACATGGATCGGTTT
MSL4PE read 1
GTCCCTTGATCTGCAAAAAGTAGACAGAGCCAACCAACAGGAAAAATTAAATAAATTAGTTGTGGTGAGAAATTCCCGATCAAGCAGCCATTGCTAGCGCTAGGATGCTTGAATCTTCATTCAAGCAGTCAGATT
PE read 2
GGTCGTTATTATTAAATATTTTATTTTTCTGTGTGATTAGCTTTTAGATGAATTGTGGGGCTCAAACTTCATGATTCATCTCAATGCTTTCTGAGCTTCTCGATCTTTTCTTCATGTTTTTTCATGGTTGAAGAG
MSL5PE read 1
GTCCCTTCCAAAGGAGATGAGAGAATAGGATATTTATAGGAAAAATATCTAAACAAAATATCTAATCTGTGCAGAGGTCACCGCCGCGGCGGTGAGTAGGTCGGTTGGTTGATCGCCTCAGCGGTGAAAAAGACG
PE read 2
GGTTTTGTTAAGTTTTAGAGCATTTTTATATGTTTTAATTAGTTTTTATTCTTTTTGTATTAAAATAGGTGTATGGGGCTAAAATATAGGAAACTTGAGCGAAAACATTGAGATCGAACCAAAACGGTCGAAGAA