Streptococcus halichoeri: Comparative Genomics of an Emerging Pathogen

Table 1

A general overview of thirteen Streptococcus halichoeri genomes.

Strain	Host source	Infected organ	Geographic region	Year	Genome accession no	Status	Coverage	Contigs	Size (Mbps)	G+C (%)	ORFs	Proteins	Ref.
P154	Dog	Ear	Finland, Uusimaa	2010	WLZC00000000	Draft	112x	42	2.06	41.3	2025	1978	This study
P376	Dog	Ear	Finland, Uusimaa	2012	WLZD00000000	Draft	90x	47	2.07	41.2	2036	1991	This study
P380	Dog	Ear	Finland, Uusimaa	2012	WLZE00000000	Draft	109x	70	2.00	41.4	1991	1953	This study
P399	Dog	Skin	Finland, Uusimaa	2012	WLZF00000000	Draft	204x	244	2.26	41.5	2198	2150	This study
P408	Dog	Ear	Finland, Uusimaa	2012	WLZG00000000	Draft	120x	33	1.91	41.7	1892	1847	This study
P791	Dog	Ear	Finland, Northern Savonia	2012	WLZH00000000	Draft	130x	50	1.93	41.6	1889	1846	This study
P993	Dog	Skin	Finland, Uusimaa	2015	WLZI00000000	Draft	90x	42	2.05	41.4	2019	1973	This study
P994	Dog	Skin	Finland, Uusimaa	2015	WLZJ00000000	Draft	115x	40	2.04	41.4	2006	1961	This study
P1033	Dog	Ear	Finland, Uusimaa	2015	WLZK00000000	Draft	117x	32	2.02	41.1	1992	1956	This study
P1063	Dog	Skin	Finland, Uusimaa	2015	WLZL00000000	Draft	120x	43	1.95	41.7	1919	1884	This study
S157 B-4	Mink	Eye	Finland, Ostrobothnia	2010	WLZM00000000	Draft	90x	62	2.03	41.3	1970	1937	This study
S171 B-3	Finnraccoon	Skin	Finland, Ostrobothnia	2010	WLZN00000000	Draft	79x	76	2.02	41.5	1971	1934	This study
S173 B-1	Blue fox	Eye	Finland, Ostrobothnia	2010	WLZO00000000	Draft	103x	54	1.93	41.7	1882	1859	This study
S185 B-2	Finnraccoon	Paw	Finland, Ostrobothnia	2011	WLZP00000000	Draft	89x	59	1.94	41.7	1891	1858	This study
S186 B-6 c	Mink	Eye	Finland, Ostrobothnia	2011	WLZQ00000000	Draft	75x	44	1.98	41.5	1924	1898	This study
S212 B-7	Mink	Skin	Finland, Ostrobothnia	2012	WLZR00000000	Draft	61x	34	2.00	41.5	1976	1937	This study
S244 B-5	Mink	Skin	Finland, Ostrobothnia	2013	WLZS00000000	Draft	130x	56	1.94	41.7	1866	1849	This study
S258 B-8	Mink	Paw	Finland, Ostrobothnia	2015	WLZT00000000	Draft	75x	41	2.00	41.4	1988	1947	This study
CCUG48324	Seal	Lung	UK, Scotland, Inverness	2003	WLZU00000000	Draft	280x	54	1.89	41.6	1873	1829	This study
CCUG67100	Human	Blood	USA, NC, Raleigh	2015	WLZV00000000	Draft	94x	34	1.91	41.7	1877	1849	This study

B-1-8 are the strain markers used by Eklund et al. [9].