International Journal of Microbiology / 2016 / Article / Tab 2

Research Article

Influence of Vinasse Application in the Structure and Composition of the Bacterial Community of the Soil under Sugarcane Cultivation

Table 2

Bacterial phylotypes distribution in clone libraries of 16S rRNA gene as affiliation by Classifier algorithm available on RDP II using cutting 80% confidence.

Phylogenetic groupsClone library (%)
SPVSPSSMCSFSTotal

Proteobacteria30.362.940.059.648.2
 Alphaproteobacteria22.156.819.355.038.3
 Betaproteobacteria5.01.80.40.42.0
 Gammaproteobacteria0.76.41.8
 Deltaproteobacteria0.40.40.2
 Unclassified Proteobacteria2.93.213.93.66.0
Acidobacteria28.28.913.26.114.1
Actinobacteria6.420.713.914.613.9
Firmicutes2.90.77.12.7
Gemmatimonadetes1.40.70.32.51.3
Others11.01.02.9
Unclassified bacteria20.05.025.017.117

Abbreviations of the four biomes are shown in Table 1.
Others: Planctomycetes, Nitrospirae, Bacteroidetes, Chloroflexi, Armatimonadetes, Candidatus phyla Saccharibacteria, and Candidatus phyla division WPS-1.
Normalization factor is 280/total, where total is sum of the number of sequences not chimeras. The normalization factor of each environment was multiplied by each taxon observed at the level of phylum and converted to percentage.

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