Research Article
Predicted Cold Shock Proteins from the Extremophilic Bacterium Deinococcus maricopensis and Related Deinococcus Species
Table 3
BLASTp analysis of Dm-Csp1 (NCBI Accession #WP 013556416.1) versus deinococci group.
| BLASTp hit species | Name of hit | Gene ID | -value | Identity (%) | Similarity (%) |
| Deinococcus maricopensis | Cold shock protein | 649901717 | | 95 | 96 | D. reticulitermitis | Cold shock protein | 2617968483 | | 76 | 87 | D. peraridilitoris | Cold shock protein | 2509591723 | | 84 | 91 | D. deserti | Cold shock protein | 643799117 | | 78 | 85 | D. xibeiensis | Cold shock protein | 2586308013 | | 77 | 86 | D. marmoris | Cold shock protein | 2562219581 | | 72 | 85 | D. wulumuqiensis | Cold shock protein | 2553983725 | | 77 | 86 | D. species 2009 | Cold shock protein | 2516938626 | | 78 | 87 | D. pimensis | Cold shock protein | 2509082093 | | 83 | 87 | D. misasensis | Cold shock protein | 2571066521 | | 79 | 87 | D. phoenicis | Cold shock protein | 2579632034 | | 78 | 84 | D. geothermalis | Cold shock protein | 641229653 | | 80 | 87 | D. apachensis | Cold shock protein | 2519136834 | | 84 | 87 | D. gobiensis | Cold shock protein | 25128201432 | | 81 | 88 | D. proteolyticus | Cold shock protein | 649963862 | | 62 | 77 | D. hopiensis | Cold shock protein | 2509586483 | | 83 | 86 | D. grandis | Cold shock protein | 2691382520 | | 80 | 90 | D. species RL | Cold shock protein | 2611619696 | | 81 | 88 | D. radiodurans | Cold shock protein | 2558116098 | | 77 | 86 | D. murrayi | Cold shock protein | 2528309711 | | 81 | 88 | D. ficus | Cold shock protein | 2526061465 | | 78 | 87 | D. fringens | Cold shock protein | 2562223450 | | 72 | 85 | D. humi | Cold shock protein | 2597538219 | | 79 | 92 | D. soli | Cold shock protein | 2637699313 | | 80 | 90 | D. species Leaf 326 | Cold shock protein | 2645444050 | | 82 | 90 | D. aquatilis | Cold shock protein | 2520600036 | | 80 | 92 | D. species YIM 77859 | Cold shock protein | 2582523845 | | 82 | 91 |
|
|
to the Integrated Microbial Genomes database (https://img.jgi.doe.gov/).
|