Research Article

Molecular Identification of Aminoglycoside-Modifying Enzymes and Plasmid-Mediated Quinolone Resistance Genes among Klebsiella pneumoniae Clinical Isolates Recovered from Egyptian Patients

Table 4

Resistance pattern and genetic profile of quinolone and aminoglycoside resistant K. pneumoniae isolates.

Isolate numberQuinolone and aminoglycoside resistance profileQuinolone resistance genetic profileNumber of quinolone resistance genesAminoglycoside resistance genetic profileNumber of aminoglycoside resistance genesTotal number of detected genes

KLP2CN, AK, CIPqnrB, qnrD, oqxA, oqxB4ant(3′′)-I, aac(6)-Ib26
KLP3CN, CP, LEVqnrB, qnrD, oqxA3aac(3)-II, aac(6)-Ib25
KLP5CNNANAaac(3)-II, aac(6)-Ib22
KLP6CNNANAaac(3)-II, aac(6)-Ib25
KLP13CN, AK, CIP, LEVqnrB, oqxA, oqxB33
KLP14CN, AK, CIP, LEVqnrB1aph(3)-VI, ant(3′′)-I23
KLP15CN, AK, CIPqnrB, oqxA, acc(6)-Ib-cr3ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI, armA58
KLP19CN, AK, CIP, LEVqnrB, oqxA, oqxB3ant(3′′)-I, aac(6)-Ib25
KLP20CN, AK, CIP, LEVqnrB, oqxA2aac(3)-II, aac(6)-Ib24
KLP23CN, AK, CIP, LEVqnrB, qnrD, qnrS, oqxA4aac(3)-II, aac(6)-Ib, aph(3)-VI37
KLP27CN, CIP, LEVqnrB, qnrD, oqxA3aac(3)-II, aac(6)-Ib25
KLP28CN, CIP, LEVqnrB, oqxA2aac(6)-Ib, aph(3)-VI, armA35
KLP29CN, AK, CIPqnrB, oqxA2ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI46
KLP30CN, AK, CIP, LEVqnrB, qnrS, oqxA, oqxB, acc(6)-Ib-cr5ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI49
KLP33CN, CIP, LEVqnrB, qnrS, oqxA, acc(6)-Ib-cr4ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI48
KLP34CNoqxA1aac(3)-II, aac(6)-Ib, aph(3)-VI34
KLP35CN, CIPacc(6)-Ib-cr1aac(6)-Ib, aac(6)-Ib, aph(3)-VI34
KLP36CN, AK, CIP, LEVoqxA1aac(3)-II, aac(6)-Ib23
KLP42CNNANAaac(3)-II, aac(6)-Ib22
KLP43CNNANAaac(3)-II, aac(6)-Ib, aph(3)-VI33
KLP50CN, LEVqnrS, oqxA, acc(6)-Ib-cr3ant(3′′)-I, aac(3)-II, aac(6)-Ib36
KLP58ACIP, LEVqnrB, qnrS, oqxA, acc(6)-Ib-cr4NANA4
KLP58BCN, CIP, LEVqnrB, qnrS, oqxA, acc(6)-Ib-cr4ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI48
KLP63CN, AK, CIP, LEVqnrB, oqxA, acc(6)-Ib-cr3ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI47
KLP65CNNANAaac(6)-Ib11
KLP69CN, AK, CIP, LEVqnrB, qnrD, oqxA, oqxB, acc(6)-Ib-cr55
KLP72CN, AK, CIP, LEVqnrB, qnrD, qnrS, oqxA, acc(6)-Ib-cr5ant(3′′)-I, aac(6)-Ib, aph(3)-VI, armA49
KLP73CNNANAaac(6)-Ib11
KLP78CN, CIP, LEVqnrB, qnrD, oqxA3aac(3)-II, aac(6)-Ib25
KLP80CN, AK, CIP, LEVqnrD, qnrS, oqxA, acc(6)-Ib-cr4ant(3′′)-I, aac(6)-Ib, aph(3)-VI, armA48
KLP81CN, CIPqnrB, oqxA, acc(6)-Ib-cr3aac(3)-II, aac(6)-Ib, aph(3)-VI36
KLP88CNNANAaac(3)-II, aac(6)-Ib, aph(3)-VI33
KLP89CN, AKNANAant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI44
KLP93CNNANAant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI44
KLP96CN, AK, CIP, LEVqnrB, qnrD, qnrS, qebA, oqxA, oqxB, acc(6)-Ib-cr7ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI, armA512
KLP99CN, AK, CIP, LEVqnrB, oqxA, oqxB, acc(6)-Ib-cr4aac(6)-Ib, aph(3)-VI26
KLP100CN, AK, CIP, LEVqnrB, oqxA, oqxB, acc(6)-Ib-cr4aac(3)-II, aac(6)-Ib26
KLP101CN, CIP, LEVqnrB, oqxA, acc(6)-Ib-cr3aac(6)-Ib, aph(3)-VI25
KLP102CIP, LEVqnrD, oqxA2NANA2
KLP103CN, AK, CIP, LEVqnrB, oqxA, oqxB3aac(6)-Ib, aph(3)-VI25
KLP104CN, CIP, LEVqnrS, oqxA, acc(6)-Ib-cr3ant(3′′)-I, aac(6)-Ib25
KLP107CNNANAaac(6)-Ib11
KLP108CN, LEVqnrB, qnrS, acc(6)-Ib-cr3aac(3)-II, aac(6)-Ib25
KLP110CN, CIP, LEVqnrB, qnrD, qnrS, oqxA, acc(6)-Ib-cr5ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI49
KLP111CNNANAant(3′′)-I, aac(3)-II, aph(3)-VI33
KLP112CN, CIP, LEVqnrB, qnrD, qnrS, oqxA, acc(6)-Ib-cr5ant(3′′)-I, aac(6)-Ib, aph(3)-VI38
KLP115CN, CIP, LEVqnrB, qnrD, qnrS, oqxA, acc(6)-Ib-cr5aac(6)-Ib16
KLP117CIP, LEVqnrB, qnrD, qnrS, oqxA, acc(6)-Ib-cr5NANA5
KLP119CNNANAaac(3)-II11
KLP121CIP, LEVqnrB, qnrD, qnrS, oqxA, oqxB5NANA5
KLP125CN, AK, CIP, LEVqnrB, qebA, oqxA, oqxB, acc(6)-Ib-cr5aac(6)-Ib16
KLP127CN, AK, CIP, LEVqnrB, qnrD, qebA, oqxA, oqxB, acc(6)-Ib-cr6ant(3′′)-I, aac(6)-Ib28
KLP128CNNANA
KLP129CN, AK, CIP, LEVqnrB, qnrS, qebA, oqxA, acc(6)-Ib-cr5ant(3′′)-I, aac(6)-Ib, aph(3)-VI, armA49
KLP134CN, AK, CIP, LEVqnrB, qnrS, oqxA, oqxB, acc(6)-Ib-cr5ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI49
KLP136CIP, LEVqnrS, oqxB2aac(6)-Ib13
KLP137CIP, LEVqnrS, oqxA, acc(6)-Ib-cr3NANA3
KLP140CNNANAaac(3)-II11
KLP141CNNANAaac(3)-II11
KLP144CN, AK, CIP, LEVacc(6)-Ib-cr1ant(3′′)-I, aac(6)-Ib, aph(3)-VI34
KLP147CN, LEVqnrB, qnrD, qnrS, oqxA, acc(6)-Ib-cr5aac(3)-II, aac(6)-Ib27
KLP148CNNANA
KLP154CIPqnrB, qnrD, qnrS, oqxA4NANA4
KLP157CNNANAaac(3)-II, aac(6)-Ib, aph(3)-VI33
KLP169CN, AK, CIP, LEVqnrB, oqxA, acc(6)-Ib-cr3ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI47
KLP170CN, AK, CIP, LEVqnrB, oqxA, oqxB, acc(6)-Ib-cr4ant(3′′)-I, aac(6)-Ib, aph(3)-VI37
KLP177CN, CIP, LEV
KLP180CN, AK, CIP, LEVqnrB, qnrD, qnrS, oqxA, oqxB, acc(6)-Ib-cr6ant(3′′)-I, aac(6)-Ib28
KLP184CIP, LEVqnrS, oqxA, oqxB3NANA3
KLP186CN, CIPqnrC, qnrD, qnrS, oqxA4aac(6)-Ib15
KLP187CIPqnrS, qnrD2NANA2
KLP197CN, AK, CIP, LEVqnrS, qebA, oqxA, acc(6)-Ib-cr4ant(3′′)-I, aac(6)-Ib, aph(3)-VI, armA48
KLP198CN, AK, CIP, LEVqnrB, qnrD, qebA, oqxA, acc(6)-Ib-cr5aac(3)-II, aac(6)-Ib27
KLP199CNNANAaac(3)-II, aac(6)-Ib22
KLP201CN, CIP, LEVqnrB, qnrD, oqxA3ant(3′′)-I, aac(3)-II, aac(6)-Ib, aph(3)-VI, armA58
KLP207CN, AK, CIP, LEVqnrB, qnrS, qebA, oqxA, acc(6)-Ib-cr5ant(3′′)-I, aac(6)-Ib, armA38

KL: Klebsiella pneumoniae, CN: gentamicin, AK: amikacin, CIP: ciprofloxacin, LEV: levofloxacin, and NA: not applicable.