Research Article
Molecular Docking Study for Binding Affinity of 2H-thiopyrano[2,3-b]quinoline Derivatives against CB1a
Table 1
Value of molecular docking of the compounds against CB1a.
| Compound | Binding affinity (kcal/mol) | RMSD l.b. | RMSD u.b. | Hydrogen bonding interaction of amino acid (distance) | Hydrophobic interaction of amino acid (distance) | Pi-stacking | Pi-cation |
| 1 | −5.3 | 3.453 | 5.011 | TRP A:12 (3.83), VAL A:14 (2.94) | PHE A:15 (3.63), LYS A:11 (3.93), ILE A:8 (3.71) | — | LYS A:11 (5.94) | 2 | −5.5 | 5.588 | 7.333 | TRP A:12 | LYS A:16 | PHE A:15 (4.89) | LYS A:26 (3.28) | 3 | −5.9 | 2.458 | 3.269 | GLU A:9 (3.17) | PHE A:15 (3.61), LYS A:11 (3.49), TRP A:25 (3.72), TRP A:12 (3.82), LYS A:10, VAL A:14 (2.97) | — | — | 4 | −6.1 | 6.842 | 8.714 | LYS A:7, GLU A:9, GLU A:32 (3.17) | PHE A:15 (3.64), ILE A:18 (2.54), ILE A:8 (3.39), LYS A:11 (1.02), VAL A:14 (2.99) | — | — |
|
|