Research Article

The Uptake Mechanism of the Cell-Penetrating pVEC Peptide

Table 2

Summary of events in the SMD simulation on pVEC with SMD force applied on the N-terminal Cα atom.

(Å)Peptide locationInteraction energy (kcal/mol)Force (pN)Number of waters in membrane

(i)30 Before entry000
(ii)20First contact with membrane−300−10000
(iii)10SMD atom through the P layer−100−100010
(iv)0 to −20Peptide moves through membrane, N-terminus reaches lower P layer−500−100020 to 5
(v)−30 to −60Peptide continues to move out−300−50060 to 10