Research Article
The Uptake Mechanism of the Cell-Penetrating pVEC Peptide
Table 2
Summary of events in the SMD simulation on pVEC with SMD force applied on the N-terminal Cα atom.
| | (Å) | Peptide location | Interaction energy (kcal/mol) | Force (pN) | Number of waters in membrane |
| (i) | 30 | Before entry | 0 | 0 | 0 | (ii) | 20 | First contact with membrane | −300 | −1000 | 0 | (iii) | 10 | SMD atom through the P layer | −100 | −1000 | 10 | (iv) | 0 to −20 | Peptide moves through membrane, N-terminus reaches lower P layer | −500 | −1000 | 20 to 5 | (v) | −30 to −60 | Peptide continues to move out | −300 | −500 | 60 to 10 |
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