Construction of Differential-Methylation Subtractive Library

Table 3

Analysis of the sequencing results of some clones from the differential-methylation subtractive library.

Clone	Size	Locus tag	Position	Gene identification
1–35	340	AT4G06700	5′	Pseudogene
1–69	227	ArthCp029	In gene	ATPB
2–10	128	ArthMp006	In gene	NAD5
2–26	188	AT4G30840	5′	Transducing/WD40 domain-containing protein
2–32	227	AT5G29041	5′	Pseudogene
2–37	307	AT2G04730	In gene	Pseudogene, F-box protein related
2–51	342	ArthCp064	In gene	RPL2
2–53	274	AT2G11720	In gene	Pseudogene
2–63	291	ArthCp079	In gene	NDHA
2–68	346	AT4G06477	3′	Pseudogene
2–71	278	AT5G34623	In gene	Pseudogene
3-4	129	AT2G06810	In gene	Pseudogene
3–23	394	AT1G42300	In gene	Transposable element gene
3–32	160	Arthct120	5′	trnN; tRNA-Asn
3–35	158	AT2G23720	In gene	Transposable element gene
3–43	315	AT3G30330	In gene	Pseudogene
3–48	275	AT3G30587	In gene	Pseudogene
3–64	315	AT2G07732	In gene	Ribulose-bisphosphate carboxylase
3–81	157	AT4G09380	In gene	Transposable element gene
3–83	247	ArthCp022	In gene	PSAA
3–85	158	AT4G28970	In gene	Transposable element gene
4–1	195	AT1G43624	5′	Unknown protein
4-5	235	AT3G33004	In gene	Pseudogene
4–16	261	AT3G43990	In gene	BAH domain-containing protein
4–32	438	ArthCp023	5′	YCF3
4–40	280	ArthCp069	In gene	RPS7
4–49	338	AT1G63360	In gene	Disease resistance protein (CC-NBS-LRR class), putative
4–62	218	AT1G16970	In gene	KU70
4–81	418	AT4G22150	5′	PUX3
5–16	186	AT5G38280	In gene	PR5K
5–38	378	AT1G22920	In gene	CSN5A
5–44	192	AT4G06678	3′	Pseudogene
5–53	229	ArthCp077	In gene	NDHG
5–58	364	ArthCp014	In gene	RPOB
5–76	311	ArthCt089	3′	trnK; tRNA-Lys
5–86	169	AT2G38490	In gene	CIPK22
5–88	288	AT3G30763	In gene	Transposable element gene
6–14	224	AT1G18070	In gene	G1 to S phase transition protein
6–15	676	ArthCr088	5′	16S ribosomal RNA
6–27	243	ArthCp062	5′	RPL22
6–28	258	AT1G23380	In gene	KNAT6
6–31	165	AT1G18370	In gene	HIK
6–87	105	ArthCp065	In gene	RPL23
7–19	386	AT4G33360	In gene	FLDH
7–44	411	ArthCp026	In gene	NDHK
9–57	213	AT4G06574	5′	Transposable element gene
9–91	273	AT1G38870	3′	Pseudogene
10–66	187	AT2G01840	In gene	Transposable element gene
11–21	212	AT1G38790	5′	Unknown protein
11–29	237	AT5G01080	In gene	Beta-galactosidase related protein
11–44	174	AT1G38630	3′	Unknown protein
11–92	407	AT3G29037	5′	Pseudogene of AT5G35760; beta-galactosidase
13–35	125	AT1G20190	In gene	EXPA11
13–56	213	ArthCp063	In gene	RPS19