Sequence Variation and Expression of the Gimap Gene Family in the BB Rat

Table 2

Gimap family thymus cDNA sequencing in DR.^+/+ and DR.^lyp/lyp rats.

Gene name	Location (bp)	RefSeq identifier	mRNA position	DR.^+/+	DR.^lyp/lyp	F344	A.A Change	Genbank accession #
Gimap8	76738163	NM_001033923	−96	C	T		5^′ UTR	DQ125335-36
			−11	T	C		5^′ UTR
Gimap9	76765555	NM_001008398	928	C	T		3^′ UTR	DQ125337-38
D4Rhw2	76.77
Gimap4	76777679	NM_173153	216	A	G	A	G 72 G (Synonymous change)	DQ125339-40
			510	G	A	G	T 170 T (Synonymous change)
			618	G	A	G	L 206 L (Synonymous change)
			922-923	TA	—	—	YLN^∗
							308
							LELIIKAWEIASFIFNQFMRD^∗
Gimap6	76794903	NM_001011968	No SNPs					DQ125342-43
Gimap7	76812445	NM_001024328	603	G	A		V 201 V (Synonymous change)	DQ125348-49
D4Rhw6	76.82
Gimap1	76829536	NM_001034849	752	T	C		M 251 T	DQ125350-51
Gimap5	76836521	NM_145680	252	C	—		IFESKIQNQDMDKDIGNCY…	DQ125352-53
							85
							SSSQRSRTKTWTRTLGTAT^∗
			523	C	T		L 175 -
IIsnp3	77.16

mRNA position is relative to the ATG start site. UTR is untranslated region.