Journal of Diabetes Research / 2013 / Article / Tab 1 / Research Article
The Hypocholesterolemic Effect of Germinated Brown Rice Involves the Upregulation of the Apolipoprotein A1 and Low-Density Lipoprotein Receptor Genes Table 1 (a) Gene name, accession number, and primer sequences used in the GeXP multiplex analysis of rat hepatic genes. (b) Gene name, accession number, and primer sequences used in the GeXP multiplex analysis of HEPG2 genes.
(a) Gene name
accession number
* Primer sequence (with universal tag) Forward Reverse LDLR
NM_175762
AGGTGACACTATAGAATAATGAAGCCATTTTCAGTGCC GTACGACTCACTATAGGGAAGGTGAACTTGGGTGAGTGG HMGCR
NM_013134
AGGTGACACTATAGAATATAGAGACGTCTGCGGTCCTT GTACGACTCACTATAGGGATTAACCCATTGGAGGTGAGC APO A1
NM_012738
AGGTGACACTATAGAATACAACTGGGACACTCTGGGTT GTACGACTCACTATAGGGAATCTCCTTCGCGTTTTTGTG Actb
NM_031144
a AGGTGACACTATAGAATAGGCATCCTGACCCTGAAGTA GTACGACTCACTATAGGGAAGACGCAGGATGGCATGAG GAPDH
NM_017008
a AGGTGACACTATAGAATACTGAGGACCAGGTTGTCTCC GTACGACTCACTATAGGGAGAGGGCCTCTCTCTTGCTCT PPIA
NM_017101
a,* AGGTGACACTATAGAATATTCTGTAGCTCAGGAGAGCA GTACGACTCACTATAGGGATTGAAGGGGAATGAGGAAAA KanRb
a Housekeeping gene. b Internal control. *Normalization gene.(b) Gene name
Accession number
* Primer sequence (with universal tag) Forward Reverse LDLR
NM_000527
AGGTGACACTATAGAATACAGGACGGCTACAGCTACCC GTACGACTCACTATAGGGACTTATCCTTCACGAGGAAAGGA HMGCR
NM_000859
AGGTGACACTATAGAATAAATGGCAACAACAGAAGGTTGT GTACGACTCACTATAGGGAGAAACGGATATAAAGGTTGCGT APO A1
NM_000039
AGGTGACACTATAGAATATGTGTACGTGGATGTGCTCA GTACGACTCACTATAGGGAGAGCTCCATCTCCTCCTGC Actb
NM_001101
a AGGTGACACTATAGAATAGATCATTGCTCCTCCTGAGC GTACGACTCACTATAGGGAAAAGCCATGCCAATCTCATC GAPDH
NM_002046
a,* AGGTGACACTATAGAATAAAGGTGAAGGTCGGAGTCAA GTACGACTCACTATAGGGAGATCTCGCTCCTGGAAGATG EEF1A1
NM_001402
a AGGTGACACTATAGAATACACACGGCTCACATTGCAT GTACGACTCACTATAGGGACACGAACAGCAAAGCGA KanRb
a Housekeeping gene. b Internal control. *Normalization gene.