Research Article

Collagen V Is a Potential Substrate for Clostridial Collagenase G in Pancreatic Islet Isolation

Table 2

Collagen peptide identification from tissue digestion samples.

Col type# tryp + # semitryp# nontryp# Gxx-G

Col-Vα12, 002
α24, 003

Col-IVα11, 232
α21, 111

Col-VIα15, 800
α29, 110
α33, 210

# tryp, # semitryp, and # nontryp indicate the number of tryptic peptides (R/K)↓xxx⋯xxx(R/K)↓xxx⋯, number of semitryptic peptides (R/K)↓xxx⋯ or ⋯xxx(R/K)↓xxx⋯, and number of nontryptic peptides, respectively.
The total number of detected peptides is shown by # tryp + # semitryp + # nontryp.
# Gxx-G can be shared in # tryp, # semitryp, and # nontryp.
Database searches for porcine collagens were based on the following NCBI accession numbers: α1(V): 62461592; α2(V): 157427707; α1(IV): 927191681; α2(IV): 927191683; α1(VI): 92020086, 92020094, and 545895133; α2(VI): 927203606; α3(VI): 92020131 and 927211912.