Semantic Modeling for Exposomics with Exploratory Evaluation in Clinical Context

Table 1

Example disease concepts of microbial etiology.

Disease CUI	Disease name	Disease semantic type	Microbe CUI	Microbe name	Microbe semantic type
C0006057	Botulism	T037 Injury or Poisoning	C0009055	Clostridium botulinum	T007 Bacterium
C0275677	Miscarriage due to Leptospira	T046 Pathologic Function	T0023358	Leptospira	T007 Bacterium
C0376618	Endotoxemia	T033 Finding	C0018150	Gram-negative bacteria	T007 Bacterium
C0266024	Moon’s molar teeth	T019 Congenital Abnormality	C0040840	Treponema pallidum	T007 Bacterium
C0032768	Postherpetic neuralgia	T047 Disease or Syndrome	C0042338	Human herpesvirus 3	T005 Virus
C0032371	Poliomyelitis	T047 Disease or Syndrome	C0206435	Human poliovirus	T005 Virus
C1535939	Pneumocystis jiroveci pneumonia	T047 Disease or Syndrome	C0320385	Pneumocystis jiroveci	T004 Fungus
C0029307	Oroya Fever	T047 Disease or Syndrome	C0318324	Bartonella bacilliformis	T007 Bacterium

Concepts that did occur in the study corpus.