Prediction of IL4 Inducing Peptides

Table 3

The performances of SVM models developed using various compositional features of peptides on rbf-kernel. The optimized parameters have been given in the brackets.

Thres.	AAC (𝑔: 0.001; 𝑐: 3; 𝑗: 1)				DPC (𝑔: 0.001; 𝑐: 3; 𝑗: 1)				AAP (𝑔: 0.1; 𝑐: 1; 𝑗: 1)
	Sen.	Spec.	Acc.	MCC.	Sen.	Spec.	Acc.	MCC.	Sen.	Spec.	Acc.	MCC.
−1	97.23	14.56	59.96	0.22	98.67	8.22	57.9	0.17	99.78	0.81	55.16	0.04
−0.9	96.57	18.06	61.18	0.24	97.68	12.26	59.17	0.2	99	4.85	56.56	0.12
−0.8	95.46	20.75	61.79	0.25	97.01	17.25	61.06	0.24	98.89	7.01	57.47	0.15
−0.7	94.03	24.39	62.64	0.26	95.69	21.7	62.33	0.26	98.56	9.7	58.51	0.19
−0.6	92.37	27.36	63.06	0.26	94.47	25.88	63.55	0.29	97.9	12.94	59.6	0.21
−0.5	90.49	30.59	63.49	0.27	92.26	28.71	63.61	0.28	96.46	16.04	60.21	0.22
−0.4	88.38	33.83	63.79	0.27	90.15	33.56	64.64	0.29	95.69	19.68	61.42	0.24
−0.3	85.62	37.2	63.79	0.26	86.17	38.27	64.58	0.28	94.25	23.85	62.52	0.26
−0.2	82.41	41.24	63.85	0.26	83.3	43.53	65.37	0.29	91.92	28.98	63.55	0.27
−0.1	78.87	45.82	63.97	0.26	80.09	48.65	65.92	0.3	88.38	34.23	63.97	0.27
0	75.77	49.6	63.97	0.26	75.44	54.45	65.98	0.31	83.74	42.59	65.19	0.29
0.1	73.12	54.04	64.52	0.28	70.24	59.7	65.49	0.3	77.99	54.85	67.56	0.34
0.2	69.14	59.43	64.76	0.29	65.49	65.9	65.67	0.31	70.58	67.25	69.08	0.38
0.3	63.94	63.88	63.91	0.28	60.4	70.62	65.01	0.31	49.12	79.11	62.64	0.29
0.4	58.3	67.79	62.58	0.26	54.76	74.53	63.67	0.3	30.97	88.01	56.68	0.23
0.5	53.1	73.18	62.15	0.27	47.79	78.44	61.6	0.27	21.13	91.64	52.92	0.18
0.6	48.01	76.55	60.87	0.25	39.27	82.35	58.69	0.24	15.27	94.47	50.97	0.16
0.7	40.82	80.19	58.57	0.23	32.08	86.25	56.5	0.21	11.06	96.23	49.45	0.14
0.8	34.85	84.1	57.05	0.21	26.55	89.62	54.98	0.2	7.3	97.84	48.12	0.12
0.9	28.87	87.06	55.1	0.19	19.91	92.18	52.49	0.17	4.65	98.79	47.08	0.1
1	23.45	90.03	53.46	0.18	12.94	95.01	49.94	0.14	2.21	99.46	46.05	0.07