Prediction of IL4 Inducing Peptides

Table 4

The performance of hybrid models that combines motif based approach and SVM models developed using various compositional features of peptides on rbf-kernel. The optimized parameters have been given in the brackets.

Thres.	AAC_MOTIF (𝑔: 0.01; 𝑐: 2; 𝑗: 1)				DPC_MOTIF (𝑔: 0.01; 𝑐: 3; 𝑗: 1)				AAP_MOTIF (𝑔: 0.1; 𝑐: 1; 𝑗: 1)
	Sen.	Spec.	Acc.	MCC.	Sen.	Spec.	Acc.	MCC.	Sen.	Spec.	Acc.	MCC.
−1	99.56	17.92	62.76	0.31	98.89	27.22	66.59	0.39	99.78	20.62	64.09	0.35
−0.9	99.23	25.47	65.98	0.38	97.9	30.05	67.31	0.39	99.12	25.2	65.8	0.37
−0.8	99.23	30.05	68.04	0.42	97.01	33.42	68.35	0.41	99	29.92	67.86	0.41
−0.7	99.12	31.54	68.65	0.43	95.91	37.2	69.44	0.42	98.67	33.69	69.38	0.44
−0.6	98.56	33.29	69.14	0.43	94.69	40.03	70.05	0.42	98.12	36.52	70.35	0.45
−0.5	98.34	34.1	69.38	0.44	93.14	43.26	70.66	0.43	97.01	38.41	70.6	0.45
−0.4	97.9	34.64	69.38	0.43	91.26	45.82	70.78	0.42	96.68	39.62	70.96	0.45
−0.3	97.01	36.12	69.56	0.43	89.16	50.27	71.63	0.43	95.46	42.18	71.45	0.46
−0.2	96.68	37.33	69.93	0.43	86.17	56.33	72.72	0.45	93.58	45.15	71.75	0.45
−0.1	94.58	39.62	69.81	0.42	83.19	60.92	73.15	0.46	91.04	47.98	71.63	0.44
0	91.26	45.28	70.53	0.42	79.09	64.96	72.72	0.45	88.16	54.45	72.96	0.46
0.1	71.13	71.56	71.32	0.43	76.33	69.41	73.21	0.46	84.07	63.21	74.67	0.49
0.2	53.43	88.95	69.44	0.44	72.23	72.51	72.36	0.45	78.76	72.1	75.76	0.51
0.3	47.9	93.8	68.59	0.46	67.37	76.28	71.39	0.43	66.26	81.13	72.96	0.47
0.4	43.92	95.69	67.25	0.45	63.83	78.57	70.47	0.42	54.98	89.08	70.35	0.46
0.5	41.15	97.84	66.71	0.46	58.63	83.02	69.62	0.42	48.34	92.18	68.1	0.44
0.6	39.93	98.52	66.34	0.46	53.43	86.25	68.23	0.41	44.47	95.01	67.25	0.44
0.7	38.72	99.19	65.98	0.46	49.12	89.49	67.31	0.41	41.48	96.5	66.28	0.44
0.8	37.17	99.46	65.25	0.45	44.47	91.91	65.86	0.4	38.61	97.84	65.31	0.44
0.9	36.06	99.46	64.64	0.44	40.04	93.8	64.28	0.39	35.62	98.79	64.09	0.43
1	34.85	99.6	64.03	0.43	35.62	95.69	62.7	0.38	32.85	99.46	62.88	0.42