(a)
(b)
(c)
Figure 3: Phylogenetic trees for case studies discussed in this paper. (a) VH4-34 lineage in the human tonsil (84 sequences); (b) heavy chain clonal family from a 2-week-old zebrafish (43 sequences); (c) developmental lineage of the HIV bnAb CAP256-VRC26 over 8 timepoints (692 sequences). Larger copies of these trees, plus other output from AnnotateTree, can be found in the Supplementary Information.