Research Article

Automatic Generation of Validated Specific Epitope Sets

Table 3

Parvoviridae virus validated epitope set downloaded from the web tool.

Epitope/clusterEpitope IDSource organismSource proteinMHC restrictionRF scoreAssay scoreAssay typeEffector origin

FYTPLADQF18474Human parvovirus B19Noncapsid protein NS-1HLA-A*24:020.5112Multimer/tetramer, 51 chromium, ELISPOTDirect ex vivo, cell line/clone
GLCPHCINV20786Human parvovirus B19Noncapsid protein NS-1HLA-A*02:01, HLA-A20.464ELISPOT, 51 chromiumDirect ex vivo
QPTRVDQKM51981Human parvovirus B19Noncapsid protein NS-1HLA-B350.293ELISPOT, 51 chromium, multimer/tetramerCell line/clone
LLHTDFEQV37397Human parvovirus B19Noncapsid protein NS-1HLA-A*02:01, HLA-A20.214ELISPOT, 51 chromiumDirect ex vivo
TAKSRVHPL62900Human parvovirus B19Viral protein 2HLA-B80.124ELISPOT, 51 chromiumDirect ex vivo
TEADVQQWL63285Human parvovirus B19Noncapsid protein NS-1HLA-B400.14ELISPOT, 51 chromiumDirect ex vivo
SSHSGSFQI61077Human parvovirus B19Noncapsid protein NS-1HLA-Class I04ELISPOT, 51 chromiumDirect ex vivo
SESSFFNLI57628Human parvovirus B19Noncapsid protein NS-1HLA-B4004ELISPOTDirect ex vivo
VQQWLTWCN70634Human parvovirus B19Noncapsid protein NS-1HLA-Class I0451 chromium, ELISPOTDirect ex vivo
VPQYGYLTL70458Adeno- associated virus - 2Major coat protein VP1HLA-B*07:0202ICS, biological activity, ELISAShort term restimulated
SALKLAIYKA56861Human parvovirus B19Noncapsid protein NS-1HLA-Class I08RNA/DNA detection, ICSDirect ex vivo
TEADVQQWLTW63286Human parvovirus B19Non-capsid protein NS-1HLA-B4404ELISPOTDirect ex vivo
QSALKLAIYK52287Human parvovirus B19Noncapsid protein NS-1HLA-Class I08ICSDirect ex vivo
IDTCISATFR25677Human parvovirus B19Noncapsid protein NS-1HLA-Class I04ELISPOTDirect ex vivo
HAKALKERMV23542Human parvovirus B19Noncapsid protein NS-1HLA-Class I04ELISPOTDirect ex vivo
GLFNNVLYH20861Human parvovirus B19Noncapsid protein NS-1HLA-Class I0451 chromium, ELISPOTDirect ex vivo
LHTDFEQVM36432Human parvovirus B19Noncapsid protein NS-1HLA-Class I04ELISPOT, 51 chromiumDirect ex vivo
LLHTDFEQVM37398Human parvovirus B19Noncapsid protein NS-1HLA-A*02:0108ICSDirect ex vivo
GLCPHCINVG20787Human parvovirus B19Noncapsid protein NS-1HLA-Class I08ICS, RNA/DNA detectionDirect ex vivo
EADVQQWLT11014Human parvovirus B19Noncapsid protein NS-1HLA-Class I04ELISPOT, 51 chromiumDirect ex vivo
RMTENIVEV145986Human parvovirus 4ORF1HLA-A*02:01012Multimer/tetramer, ICSShort term restimulated, direct ex vivo