Research Article
Kidney Transplant Outcome Is Associated with Regulatory T Cell Population and Gene Expression Early after Transplantation
Table 6
Whole blood gene expression in kidney transplant recipients (data presented as ΔΔCT).
| Gene | Control group mean ± SD (median; IQR) | Time from KTx | Mean ± SD (median; IQR) | -KTx vs. control |
| CD4 | (0.44; -0.52–0.65) | 1 week | (1.04; 0.58–1.62) | 0.003 | 1 month | (0.76; 0.50–0.99) | 0.010 | 3 months | (1.02; 0.79–1.74) | <0.001 | 6 months | (1.10; 0.53–1.68) | 0.001 | 12 months | (0.76; 0.33–1.10) | 0.028 | y. | (0.56; -0.08–1.14) | 0.171 |
| CD8 | (0.02; -0.56–1.06) | 1 week | (-0.09; -0.89–1.26) | 0.949 | 1 month | (0.62; -0.02–1.57) | 0.146 | 3 months | (1.38; 0.64–2.64) | 0.003 | 6 months | (2.05; 1.45–3.26) | <0.001 | 12 months | (1.36; 0.89–2.07) | 0.001 | y. | (0.94; 0.38–1.55) | 0.090 |
| CTLA4 | (-0.10; -0.76–0.72) | 1 week | (0.37; -0.54–2.27) | 0.950 | 1 month | (-0.01; -0.47–1.04) | 0.786 | 3 months | (0.30; -0.41–0.83) | 0.840 | 6 months | (0.85; 0.08–2.14) | 0.038 | 12 months | (0.27; -0.21–0.70) | 1.000 | y. | (0.02; -0.66–0.83) | 0.900 |
| FOXP3 | (0.15; -0.33–0.42) | 1 week | (0.03; -0.67–0.78) | 1.000 | 1 month | (-0.03; -0.63–0.19) | 0.730 | 3 months | (-0.04; -0.60–0.45) | 0.728 | 6 months | (0.19; -0.40–0.90) | 1.000 | 12 months | (-0.22; -0.54–0.05) | 1.000 | y. | (-0.39; -0.95–0.30) | 0.846 |
| GZMB | (0.37; -1.28–1.56) | 1 week | (-0.34; -1.38–0.83) | 0.728 | 1 month | (0.80; -0.31–1.40) | 0.505 | 3 months | (1.18; 0.08–2.19) | 0.200 | 6 months | (1.98; 1.20–3.03) | 0.004 | 12 months | (1.38; 0.75–1.98) | 0.046 | y. | (0.99; -0.47–1.94) | 0.708 |
| IL10 | (-0.29; -1.13–0.91) | 1 week | (4.20; 2.11–5.51) | <0.001 | 1 month | (0.76; 0.13–2.44) | 0.045 | 3 months | (1.21; -0.02–2.06) | 0.035 | 6 months | (2.36; 0.91–3.88) | <0.001 | 12 months | (0.22; -1.10–2.17) | 0.305 | y. | (0.92; -0.44–1.94) | 0.082 |
| IL2RA | (-0.04; -0.57–0.62) | 1 week | (-0.03; -0.58–1.03) | 1.000 | 1 month | (-0.08; -0.66–0.34) | 1.000 | 3 months | (-0.08; -0.56–0.71) | 1.000 | 6 months | (0.19; -0.35–1.03) | 1.000 | 12 months | (-0.25; -0.71–0.03) | 1.000 | y. | (0.08; -0.78–0.80) | 0.993 |
| IL4 | (-0.28; -0.77–0.78) | 1 week | (-1.10; -2.47–2.13) | 0.514 | 1 month | (0.45; -0.57–2.15) | 0.259 | 3 months | (0.90; -0.09–3.01) | 0.210 | 6 months | (0.48; -0.57–2.21) | 0.372 | 12 months | (0.70; -0.29–1.73) | 0.495 | y. | (-0.16; -1.45–0.31) | 0.476 |
| NOTCH | (-0.06; -0.42–0.55) | 1 week | (-0.22; -0.45–0.15) | 1.000 | 1 month | (-0.48; -0.65 to -0.15) | 0.040 | 3 months | (-0.04; -0.35–0.34) | 0.963 | 6 months | (0.03; -0.29–0.96) | 1.000 | 12 months | (-0.05; -0.37–0.30) | 1.000 | y. | (0.05; -0.46–0.74) | 0.860 |
| PDCD1 | (0.24; -0.73–0.67) | 1 week | (-0.43; -1.26–1.28) | 0.950 | 1 month | (-0.54; -1.00 to -0.07) | 0.225 | 3 months | (0.18; -0.49–1.54) | 1.000 | 6 months | (1.24; 0.40–2.67) | 0.009 | 12 months | (0.13; -0.21–1.06) | 1.000 | y. | (0.27; -0.78–0.91) | 0.787 |
| PRF1 | (0.43; -0.91–1.28) | 1 week | (-0.16; -1.38–0.53) | 0.746 | 1 month | (0.28; -0.53–0.78) | 0.888 | 3 months | (0.81; -0.02–1.50) | 0.468 | 6 months | (1.17; 0.44–2.51) | 0.066 | 12 months | (1.14; 0.43–1.73) | 0.475 | y. | (0.94; -0.02–1.96) | 0.438 |
| TGFB | (0.24; -0.53–0.98) | 1 week | (1.31; 1.00–1.62) | 0.002 | 1 month | (0.91; 0.58–1.14) | 0.031 | 3 months | (1.04; 0.70–1.45) | 0.010 | 6 months | (1.27; 0.80–1.84) | 0.003 | 12 months | (0.98; 0.53–1.38) | 0.054 | y. | (0.76; 0.16–1.25) | 0.146 |
| TNFA | (0.17; -0.41–0.76) | 1 week | (0.17; -0.58–1.55) | 0.960 | 1 month | (0.48; -0.19–0.98) | 0.904 | 3 months | (0.40; -0.05–1.39) | 0.755 | 6 months | (0.56; -0.21–1.77) | 0.732 | 12 months | (0.04; -0.35–0.73) | 0.909 | y. | (0.52; -0.12–1.13) | 0.708 |
| TNFRSF18 | (0.10; -0.53–0.47) | 1 week | (0.69; 0.15–2.01) | 0.051 | 1 month | (0.94; 0.58–1.21) | 0.016 | 3 months | (0.89; 0.41–1.35) | 0.042 | 6 months | (0.84; 0.02–1.84) | 0.052 | 12 months | (1.10; 0.13–1.55) | 0.064 | y. | (0.47; -0.16–1.13) | 0.124 |
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