Journal of Oncology

Research Article

Transcriptome-Wide Detection of Differentially Expressed Coding and Non-Coding Transcripts and Their Clinical Significance in Prostate Cancer

Table 1

Androgen-regulated genes known to play a role in prostate cancer with non-coding transcripts differentially expressed. All these genes present evidence of being androgen sensitive, based on ARGDB.
GeneTranscriptComparison
ABCC4ABCC4-002NvsP
ABCC4-004NvsP PvsM
ACADLACADL-001* PvsM NvsM
ACADL-004 PvsM
ACPPACPP-001* PvsM
ACPP-005 PvsM NvsM
ADAMTS1ADAMTS1-001* NvsM
ADAMTS1-002 NvsM
ADAMTS1-003* NvsM
ANO7ANO7-006 PvsM NvsM
ANO7-007 PvsM NvsM
ANXA1ANXA1-001 PvsM NvsM
ANXA1-005 PvsM NvsM
ARAR-001* NvsM
AR-005 PvsM NvsM
AR-203* NvsM
BNC2BNC2-001 NvsM
BTG3BTG3-005 PvsM NvsM
BTG3-006 NvsM
CACNA1CCACNA1C-016 NvsM
CACNA1C-018* NvsM
CACNA1C-201* NvsM
CACNA1DCACNA1D-004* NvsM
CACNA1D-006 PvsM NvsM
CACNA1D-007* PvsM NvsM
CACNA1D-201* PvsM NvsM
CALD1CALD1-005* PvsM NvsM
CALD1-008 PvsM NvsM
CALD1-012* PvsM
CD40CD40-005NvsP NvsM
CD40-201* NvsM
CD44CD44-014 NvsM
CEACAM1CEACAM1-004* PvsM NvsM
CEACAM1-010 PvsM NvsM
COL1A2COL1A2-002 NvsM
COL1A2-005 NvsM
COL1A2-006 NvsM
COL1A2-012 NvsM
DPP4DPP4-001* PvsM NvsM
DPP4-006 PvsM NvsM
DSTDST-006 NvsM
DST-010* PvsM NvsM
DST-015* PvsM NvsM
DST-032 NvsM
FBLN1FBLN1-001* PvsM NvsM
FBLN1-016 NvsM
FGFR1FGFR1-005 NvsM
FGFR2FGFR2-008NvsP PvsM NvsM
FGFR2-016*NvsP PvsM NvsM
FGFR2-201* PvsM NvsM
GOLM1GOLM1-008NvsP
GSNGSN-011 PvsM NvsM
HSPA8HSPA8-008 PvsM
HSPA8-013 PvsM NvsM
HSPA8-025 PvsM
IFI16IFI16-003* PvsM NvsM
IFI16-008 PvsM NvsM
INSIG1INSIG1-004 NvsM
IRS1IRS1-001* PvsM NvsM
IRS1-002 NvsM
KHDRBS3KHDRBS3-003 PvsM
MAT2AMAT2A-012NvsP
MMEMME-001* PvsM NvsM
MME-003* NvsM
MME-010* NvsM
MME-011* NvsM
MME-013 NvsM
NAMPTNAMPT-006NvsP PvsM
NAMPT-007NvsP PvsM
NAMPT-008 PvsM
NAMPT-009 PvsM
NCAPD3NCAPD3-004 PvsM
NCAPD3-006* PvsM NvsM
NCAPD3-011 PvsM
NCAPD3-015 PvsM NvsM
NCAPD3-016 PvsM
PALLDPALLD-015 PvsM NvsM
PART1PART1-001 PvsM
PBX1PBX1-003 NvsM
PDE4BPDE4B-008* PvsM
PDE4B-016 PvsM
PDE4DPDE4D-005 PvsM
PDE4D-013 PvsM NvsM
PDE4D-016* PvsM NvsM
PDE4D-020* PvsM NvsM
PDE4D-021* PvsM
PDE4D-022 NvsM
PDE4D-026 NvsM
PDLIM5PDLIM5-010* PvsM
PDLIM5-017 PvsM NvsM
PIK3R1PIK3R1-008 NvsM
PPP2CBPPP2CB-003 NvsM
RANRAN-006 PvsM NvsM
SEMA3CSEMA3C-001* PvsM NvsM
SEMA3C-008 PvsM NvsM
SVILSVIL-004 PvsM NvsM
TBC1D1TBC1D1-005 NvsM
TBC1D1-010 NvsM
TBC1D1-013 NvsM
TGM4TGM4-001*NvsP PvsM NvsM
TGM4-008NvsP NvsM
THBS1THBS1-001* PvsM
THBS1-004 PvsM
THBS1-008 PvsM
TNCTNC-002 PvsM NvsM
TNC-010* PvsM NvsM
TPM2TPM2-002* PvsM NvsM
TPM2-003 PvsM NvsM
TPM2-005* PvsM NvsM
TSC22D1TSC22D1-004 PvsM
VCLVCL-005 PvsM NvsM
VEGFAVEGFA-005 NvsM
VEGFA-007 NvsM
WSB1WSB1-003 PvsM
XBP1XBP1-005 PvsM NvsM
XRCC2XRCC2-002 PvsM NvsM
*indicates a protein-coding transcript. NvsP: normal adjacent versus primary tumor comparison. PvsM: primary tumor versus metastatic sample comparison. NvsM: normal adjacent versus metastatic sample comparison.