Molecular Epidemiology and Genetic Diversity of Norovirus in Young Children in Phnom Penh, Cambodia

Figure 3

Representative plots of Simplot analysis of each norovirus recombinant. The -axis indicates a degree of similarity between query recombinant and recombinant and two nonrecombinant parental norovirus strains. Sample name and recombination genotype are located on top of each plot. Samples names are indicated as NP ###-# for case and NPC ###-# for control. # after the sample name indicates colony number of clone for that sample. Nonrecombinant parental strains used are GII.P3/GII.3-AB112332, GII.P6/GII.6-AB039779, GII.P7/GII.7-AF414409, GII.P12/GII.12-AB525813, GII.P13/GII.13-EU921354, GII.14-AY130761, GII.P16/GII.16-GQ856476, GII.P17/GII,17-AB983218, GII.P20/GII.20-EU275779, and GII.P21/GII.21-EU019230. Recombinant parental strains used are GII.P7/GII.6-AB504694, GII.P7/GII.14_EF670650, GII.P7/GII.P20-AB542917, GII.P12/GII.13-AB354294, GII.P16/GII.17-AY502009, and GII.P21/GII.3-KM198586.