Research Article

Expression Profiling of Long Noncoding RNA Splice Variants in Human Microvascular Endothelial Cells: Lipopolysaccharide Effects In Vitro

Table 2

Differentially expressed splice variants of functionally annotated lncRNAs from HMECs following LPS treatment for 3 and 24 h.

Functionally annotated lncRNAsTotal number of splice variantsNumber of differentially expressed splice variantsDifferentially expressed NONCODE splice variantsClass

ADAMTS9-AS2112NONHSAT090266, NONHSAT090274Antisense

AK082072399NONHSAT102610, NONHSAT102619, NONHSAT102626LINC
NONHSAT102631, NONHSAT102632, NONHSAT102634
NONHSAT102637, NONHSAT102640, NONHSAT102641

ANRIL208NONHSAT130413, NONHSAT130414, NONHSAT130416,Antisense
NONHSAT130417, NONHSAT130422, NONHSAT130423,
NONHSAT130425, NONHSAT130433

CCAT1161NONHSAT129019Antisense

CDR1-AS51NONHSAT138820Antisense

CRNDE132NONHSAT142619, NONHSAT142620LINC

CTBP1-AS81NONHSAT094692LINC

CYP4A22-AS122NONHSAT003050, NONHSAT003054Antisense

Cyrano142NONHSAT041921, NONHSAT041926Antisense

DHFR upstream transcripts11NONHSAT102417Antisense; exonic

DHRS4-AS173NONHSAT035952, NONHSAT035953, NONHSAT035955Antisense

DISC221NONHSAT010195Exonic

DLEU1486NONHSAT033809, NONHSAT033813, NONHSAT033815Antisense
NONHSAT033822, NONHSAT033823, NONHSAT033850

DLEU2248NONHSAT033771, NONHSAT033774, NONHSAT033780Antisense
NONHSAT033788, NONHSAT033796, NONHSAT033798
NONHSAT033800, NONHSAT033805

EGO32NONHSAT087635, NONHSAT087634Antisense

GAS5333NONHSAT007665, NONHSAT007698, NONHSAT007698Antisense

Gomafu526NONHSAT084541, NONHSAT084545, NONHSAT084547LINC
NONHSAT084548, NONHSAT084549, NONHSAT084551

H191710NONHSAT017460, NONHSAT017461, NONHSAT017461LINC
NONHSAT017465, NONHSAT017466, NONHSAT017467
NONHSAT017469, NONHSAT017471, NONHSAT017472,
NONHSAT017474

HOTAIRM154NONHSAT119664, NONHSAT119665, NONHSAT119666,LINC
NONHSAT119667

Hoxa11as91NONHSAT119711Antisense

IPW8122NONHSAT041066, NONHSAT040981, NONHSAT040985Antisense
NONHSAT040986, NONHSAT040988, NONHSAT040989
NONHSAT040990, NONHSAT040991, NONHSAT041000
NONHSAT041004, NONHSAT041006, NONHSAT041023
NONHSAT041028, NONHSAT041047, NONHSAT041054
NONHSAT041057, NONHSAT041060, NONHSAT041061
NONHSAT041062, NONHSAT041064, NONHSAT041065
NONHSAT041140

Jpx143NONHSAT137572, NONHSAT137582, NONHSAT137583LINC

LINC0056821NONHSAT006301LINC

LUCAT1134NONHSAT102744, NONHSAT102748, NONHSAT102749LINC
NONHSAT102750

linc0046766NONHSAT009289, NONHSAT009290, NONHSAT009291LINC
NONHSAT009292, NONHSAT009293, NONHSAT009294

lincRNA-SFMBT281NONHSAT011261LINC

HMECs: human dermal microvascular endothelial cells; LINC: long intergenic noncoding RNA.