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Study objects | Sample type | Technology | Increased | Decreased | References |
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Human, compared RA patients with nonarthritic controls | Stool | Metagenomic shotgun sequencing | Clostridiaceae | | [80] |
Human, compared RA patients with osteoarthritis patients | Stool | 16S ribosome (r)RNA sequencing | Lactobacilli, Prevotella | Bacteroides, Bifidobacterium, Bacteroidetes/Firmicutes | [81] |
Human, compared RA patients with healthy controls | Stool | 16S rRNA sequencing | Bacteroides, Escherichia-Shigella | Lactobacillus, Alloprevotella, Enterobacter, Odoribacter | [78] |
Human, compared RA patients with healthy controls | Stool | Whole-genome shotgun sequencing | Prevotella | | [73] |
Human, compared RA patients with healthy controls | Stool | 16S rRNA sequencing | Verrucomicrobiae, Akkermansia | | [75] |
Human, compared preclinical RA patients with first-degree relatives (FDR) of RA patients | Stool | 16S rRNA sequencing | Prevotellaceae, Prevotella spp. | | [70] |
Human, compared FDR of RA patients with healthy controls | Stool | 16S rRNA sequencing | Collinsella | Actinobacteria | [69] |
Human, compared RA patients with healthy controls | Stool | Metagenomic shotgun sequencing | Lactobacillus salivarius | Haemophilus spp. | [77] |
Human, compared RA patients with healthy controls | Stool | qPCR | Bacteroides, Prevotella | Clostridium leptum | [97] |
Mouse, compared mice with CIA at the initial peak and relapse of arthritis with healthy controls | Stool | 16S rRNA gene sequencing | Bacteroides, Bacteroidales | Firmicutes | [86] |
Mouse, compared mice with CIA with healthy controls | Stool | 16S rRNA gene sequencing | Clostridiales, Deferribacterales, Mucispirillum | Enterobacteriales | [94] |
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