|
| Group 1 |
|
| Bacteroidetes-Bacteroidia-Bacteroidales-Rikenellaceae-Alistipes-onderdonkii |
| Bacteroidetes-Bacteroidia-Bacteroidales-Rikenellaceae-Alistipes-putredinis |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-coprocola |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-coprophilus |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-dorei |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-fragilis |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-intestinalis |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-plebeius |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-thetaiotaomicron |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-uniformis |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-vulgatus |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-xylanisolvens |
| Bacteroidetes-Bacteroidia-Bacteroidales-Porphyromonadaceae-Barnesiella-intestinihominis |
| Firmicutes-Clostridia-Clostridiales-Eubacteriaceae-Eubacterium-biforme |
| Firmicutes-Clostridia-Clostridiales-Eubacteriaceae-Eubacterium-ventriosum |
| Firmicutes-Clostridia-Clostridiales-Clostridiales-Flavonifractor-plautii |
| Proteobacteria-Gammaproteobacteria-Enterobacteriales-Enterobacteriaceae-Klebsiella-variicola |
| Firmicutes-Bacilli-Lactobacillales-Lactobacillaceae-Lactobacillus-rogosae |
| Firmicutes-Negativicutes-Veillonellales-Veillonellaceae-Megasphaera-sp. |
| Bacteroidetes-Bacteroidia-Bacteroidales-Porphyromonadaceae-Odoribacter-splanchnicus |
| Bacteroidetes-Bacteroidia-Bacteroidales-Porphyromonadaceae-Parabacteroides-distasonis |
| Bacteroidetes-Bacteroidia-Bacteroidales-Porphyromonadaceae-Parabacteroides-merdae |
| Bacteroidetes-Bacteroidia-Bacteroidales-Prevotellaceae-Prevotella-copri |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Roseburia-sp. |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Ruminococcus-bromii |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Ruminococcus-callidus |
| Proteobacteria-Betaproteobacteria-Burkholderiales-Sutterellaceae-Sutterella-wadsworthensis |
|
| Group 2 |
|
| Actinobacteria-Actinomycetales-Actinomycineae-Actinomycetaceae-Actinomyces-odontolyticus |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-massiliensis |
| Actinobacteria-Actinobacteria-Bifidobacteriales-Bifidobacteriaceae-Bifidobacterium-adolescentis |
| Actinobacteria-Actinobacteria-Bifidobacteriales-Bifidobacteriaceae-Bifidobacterium-bifidum |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Blautia-luti |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Blautia-wexlerae |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Butyrivibrio-crossotus |
| Actinobacteria-Coriobacteriia-Coriobacteriales-Coriobacteriaceae-Collinsella-aerofaciens |
| Firmicutes-Clostridia-Clostridiales-Eubacteriaceae-Eubacterium-eligens |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Faecalibacterium-prausnitzii |
| Firmicutes-Clostridia-Clostridiales-Clostridiales-Howardella-ureilytica |
| Proteobacteria-Gammaproteobacteria-Enterobacteriales-Enterobacteriaceae-Klebsiella-pneumoniae |
| Firmicutes-Negativicutes-Veillonellales-Veillonellaceae-Megasphaera-micronuciformis |
| Proteobacteria-Betaproteobacteria-Burkholderiales-Sutterellaceae-Parasutterella-excrementihominis |
| Firmicutes-Clostridia-Clostridiales-Peptostreptococcaceae-Peptostreptococcus-stomatis |
| Firmicutes-Negativicutes-Acidaminococcales-Acidaminococcaceae-Phascolarctobacterium-faecium |
| Spirochaetes-Spirochaetes-Spirochaetales-Spirochaetaceae-Treponema-succinifaciens |
| Firmicutes-Erysipelotrichia-Erysipelotrichales-Erysipelotrichaceae-Turicibacter-sanguinis |
| Lentisphaerae-Lentisphaeria-Victivallales-Victivallaceae-Victivallis-vadensis |
|
| Group 3 |
|
| Proteobacteria-Alphaproteobacteria-Rhodospirillales-Acetobacteraceae-Acidiphilium-sp. |
| Verrucomicrobia-Verrucomicrobiae-Verrucomicrobiales-Akkermansiaceae-Akkermansia-muciniphila |
| Proteobacteria-Gammaproteobacteria-Aeromonadales-Succinivibrionaceae-Anaerobiospirillum-succiniciproducens |
| Actinobacteria-Actinobacteria-Bifidobacteriales-Bifidobacteriaceae-Bifidobacterium-longum |
| Proteobacteria-Deltaproteobacteria-Desulfovibrionales-Desulfovibrionaceae-Bilophila-wadsworthia |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Blautia-obeum |
| Firmicutes-Erysipelotrichia-Erysipelotrichales-Erysipelotrichaceae-Bulleidia-p-1630-c5 |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Coprococcus-catus |
| Proteobacteria-Deltaproteobacteria-Desulfovibrionales-Desulfovibrionaceae-Desulfovibrio-piger |
| Firmicutes-Negativicutes-Veillonellales-Veillonellaceae-Dialister-succinatiphilus |
| Firmicutes-Clostridia-Clostridiales-Eubacteriaceae-Eubacterium-siraeum |
| Firmicutes-Negativicutes-Veillonellales-Veillonellaceae-Megasphaera-elsdenii |
| Firmicutes-Negativicutes-Selenomonadales-Selenomonadaceae-Mitsuokella-jalaludinii |
| Firmicutes-Negativicutes-Selenomonadales-Selenomonadaceae-Mitsuokella-multacida |
| Bacteroidetes-Bacteroidia-Bacteroidales-Prevotellaceae-Prevotella-stercorea |
| Firmicutes-Clostridia-Clostridiales-Clostridiaceae-Romboutsia-ilealis |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Ruminiclostridium-siraeum |
| Actinobacteria-Coriobacteriia-Eggerthellales-Eggerthellaceae-Slackia-isoflavoniconvertens |
| Proteobacteria-Betaproteobacteria-Burkholderiales-Sutterellaceae-Sutterella-sp. |
|
| Group 4 |
|
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-caccae |
| Bacteroidetes-Bacteroidia-Bacteroidales-Bacteroidaceae-Bacteroides-ovatus |
| Firmicutes-Erysipelotrichia-Erysipelotrichales-Erysipelotrichaceae-Catenibacterium-mitsuokai |
| Firmicutes-Clostridia-Clostridiales-Clostridiaceae-Clostridium-bartlettii |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Coprococcus-comes |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Coprococcus-eutactus |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Dorea-formicigenerans |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Dorea-longicatena |
| Firmicutes-Clostridia-Clostridiales-Eubacteriaceae-Eubacterium-hadrum |
| Firmicutes-Clostridia-Clostridiales-Eubacteriaceae-Eubacterium-hallii |
| Firmicutes-Clostridia-Clostridiales-Eubacteriaceae-Eubacterium-ramulus |
| Proteobacteria-Alphaproteobacteria-Rhizobiales-Hyphomicrobiaceae-Gemmiger-formicilis |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Lachnoclostridium-clostridioforme |
| Firmicutes-Clostridia-Clostridiales-Oscillospiraceae-Oscillibacter-sp. |
| Firmicutes-Negativicutes-Acidaminococcales-Acidaminococcaceae-Phascolarctobacterium-succinatutens |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Roseburia-faecis |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Roseburia-inulinivorans |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Ruminococcus-faecis |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Ruminococcus-gnavus |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Ruminococcus-sp. |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Ruminococcus-torques |
| Firmicutes-Negativicutes-Selenomonadales-Selenomonadaceae-Selenomonas-bovis |
| Proteobacteria-Betaproteobacteria-Burkholderiales-Sutterellaceae-Sutterella-stercoricanis |
|
| Group 5 |
|
| Proteobacteria-Gammaproteobacteria-Pasteurellales-Pasteurellaceae-Actinobacillus-minor |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Blautia-faecis |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Blautia-producta |
| Firmicutes-Clostridia-Clostridiales-Clostridiaceae-Clostridium-disporicum |
| Firmicutes-Clostridia-Clostridiales-Clostridiaceae-Clostridium-perfringens |
| Firmicutes-Clostridia-Clostridiales-Clostridiaceae-Clostridium-sp. |
| Proteobacteria-Deltaproteobacteria-Desulfovibrionales-Desulfovibrionaceae-Desulfovibrio-D168 |
| Proteobacteria-Gammaproteobacteria-Enterobacteriales-Enterobacteriaceae-Escherichia-coli |
| Proteobacteria-Gammaproteobacteria-Pasteurellales-Pasteurellaceae-Haemophilus-parainfluenzae |
| Proteobacteria-Gammaproteobacteria-Pasteurellales-Pasteurellaceae-Haemophilus-pittmaniae |
| Firmicutes-Bacilli-Lactobacillales-Lactobacillaceae-Lactobacillus-ruminis |
| Proteobacteria-Gammaproteobacteria-Pseudomonadales-Pseudomonadaceae-Pseudomonas-lini |
| Firmicutes-Clostridia-Clostridiales-Lachnospiraceae-Roseburia-intestinalis |
| Firmicutes-Clostridia-Clostridiales-Ruminococcaceae-Ruminococcus-gauvreauii |
| Firmicutes-Negativicutes-Veillonellales-Veillonellaceae-Veillonella-dispar |
|
