Epitope Analysis of Cerebrospinal Fluid IgG in Japanese Multiple Sclerosis Patients Using Phage Display Method

Table 2

Common peptide motifs in control group.

Cont 1	Cont 2	Cont 3	Cont 4	Cont 5	Cont 6	Cont 7	Cont 8	Cont 9	Cont 10
	[IHHPAHG]	[NPIEAF]	[KPPNP]	[GVTDY]		[HILHNPF]	[GPALSxSE]	[KPPNPS]	[IYPTTLPW]
	IHHPAHG	NPVENF	KPPNP	GVQDY		HILHNPF	RPALSMYE	KPPNPM	IYRTTLPW
	MHHPAHQ	NHCCAF	KPPNP	GVHDY		HSLHNPF	RPALSMYE	KPPNPM	IYPTTLPW
	SHHPAHG	NPIELW	KPPNP	GMTDY		HLLHSPF	MPALSVSE	KPPNPS	IYTVTLPW
	NHHPAHM	NPIVNY	KPPNP	GLIDY		HYAHNPF	GPALSHSE	KPPNPS
		NPVLAW	KPPNP	QITDY		HNHHNPF	RPALTPQE	KPPNPS	[YLDL]
	[YLPK]	NPIEKL	KPPNP			HIMHDPL	QPALSSTE	KPPNPE
		NPVLTF		[LPHWSP]		HNLHSPW	MPMLSAEE	KPPNPT	YYDL
	YLPK		[SLQSLRAAAM]				SPHISNKE	KPPNPL	YLDL
	YEPQ			LPHWSP			GPSLLNVE		YPDL
	YLSK		SIQSLRTAFM	LPHWSP			TPALHRLE
	YLPT		SLQSLRGASA	LPHWMP			VPTLNVAE
			SLSSLRAAAF	LPHWQP			GPSLHPSE
			SVRSLHERVM	LPHWSF			MPGLPSQE
				IRHWVP			SPATYFLE
							SPQLSAHG
							[PWSK]
							PWSK
							PWSK
							PWSK
							PWSK
							PWSK
							PWSK
							PWSK
							PWSK

Parentheses indicate common peptide motifs in a control case.
Peptide sequences derived from random peptide library are listed below.