|
| Dictionary | Enriched unique terms in the KB | Status |
|
| Chemicals/compounds | | |
| Chemical Entities of Biological Interest (ChEBI) [84] | 17981 | |
| Toxins (T3DB) [85] | 2083 | |
| Lipids (lipids maps) [86, 87] | 2852 | |
| Amyloids (Human and Mouse); compiled in-house | 393 | Newly compiled |
| Functional annotation | | |
| Biological Process (GO) [88] | 5438 | |
| Cellular Component (GO) [88] | 1125 | |
| Molecular Function (GO) [88] | 1755 | |
| Pathways (KEGG [89], Reactome [90], UniPathway [91], and PANTHER [92]) | 1445 | |
| Diseases | | |
| DOID Ontology (BioPortal)—Human Disease Ontology [93] | 3467 | |
| ADO Ontology (BioPortal)—Alzheimer’s disease ontology [94] | 937 | Newly compiled |
| DMTO Ontology (BioPortal)—Diabetes Mellitus Treatment Ontology [95] | 1941 | Newly compiled |
| HFO Ontology (BioPortal)—Heart Failure Ontology [96] | 1001 | Newly compiled |
| CVDO Ontology (BioPortal)—Cardiovascular Disease Ontology [97] | 53 | Newly compiled |
| HP Ontology (BioPortal)—Human Phenotype Ontology [98] | 3204 | |
| UBERON Ontology (BioPortal)—Uber Anatomy Ontology [99] | 6540 | Newly compiled |
| ICD9 Ontology (BioPortal)—International Classification of Diseases, Version 9 - Clinical Modification [100] | 688 | |
| Drugs | | |
| Drugs (DrugBank) [101] | 3918 | |
| ATC Ontology (BioPortal)—Anatomical Therapeutic Chemical Classification [102] | 1991 | Newly compiled |
| CSSO Ontology (BioPortal)—Clinical Signs and Symptoms Ontology | 210 | Newly compiled |
| SIDER (Drug Indications and Side Effects) [103] | 3190 | |
| Human | | |
| Human Genes and Proteins (Entrez Gene) [104] | 21858 | |
| Human Transcription Factors [105] | 1505 | |
| Human Transcription Co-Factors (TcoF-DB) [105] | 384 | |
Human microRNAs (HGNC and Entrez Gene)
PMEDIDs for HGNC and Entrez Gene | 1811 | Updated |
| Human Long Non-Coding RNAs (HGNC) [106] | 460 | |
| Mutations (tmVar) [107] | 12514 | |
| Human Anatomy (in-house compiled) | 2538 | |
| OMIT Ontology (BioPortal)—Ontology for MicroRNA Target [108] | 656 | Newly compiled |
|
