RNA Expression Profile and Alternative Splicing Signatures of Genistein-Treated Breeder Hens Revealed by Hepatic Transcriptomic Analysis

Table 8

PANTHER classification system statistical overrepresentation test of Cuffdiff results using DEL adjacent genes (LGE vs. CON and HGE vs. CON).

PANTHER pathways	Gallus gallus (REF)		Client text box input
	#	#	Expected	Fold enrichment	+/−	value
LGE vs. CON
JAK/STAT signaling pathway	18	1	0.03	36.63	+	0.028
Vasopressin synthesis	25	1	0.04	26.38	+	0.039
EGF receptor signaling pathway	139	4	0.21	18.97	+	<0.001
Interleukin signaling pathway	83	2	0.13	15.89	+	0.007
Transcription regulation by b ZIP transcription factor	56	1	0.08	11.77	+	0.083
FGF signaling pathway	119	2	0.18	11.08	+	0.014
HGE vs. CON
JAK/STAT signaling pathway	18	1	0.02	42.49	+	0.024