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Gene symbols | For real-time qPCR |
Sequences |
Forward (5 →3) | Reverse (5 →3) |
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ADIPOQ-AS1 | GGATTCCCGGAAAGCCTCGG | GAGATGGCACCCCGTGGACC |
AGBL5-AS1 | GCGCATTATCGGGCTGTGCC | CACCCGGGACACCTAGACAT |
C14orf132 | GCCCAGAGACAGCCGAGTGC | AAGTCCTCGTTGGGCGAGTC |
CPEB1-AS1 | CAAGGGAGCGGGTGTCTGGA | CAGGCAGCTGGCAGGACCTG |
DDX11-AS1 | GGTTCTGGGAGATGACCAATGG | CCATAGTTTCAGGATGCTGGCAG |
ELF3-AS1 | CATCACCTGCCTGGACTCCA | GCGGTTCGTGATGACTTCACC |
ELOA-AS1 | CAGCAAGACTGTCAGCTCGG | AGCCCAGGATACAGAGCCAG |
EMX2OS | GCGGAGTATTGATCGGCTGC | GGCATGCCCTGCCTTCATTC |
FAM87B | GAAGGCGCCTCCCTCTGTGG | CTGCAGGCCGAGCACACACC |
FGD5-AS1 | CTCCACCCTGCCTTCTCGCT | CTTCTTAAGCCACCACTGCACTG |
HCG23 | AGGGCCTTCACAAGCACAGAC | ACTTCTCATGTGTTAGGGAGGCTG |
HHIP-AS1 | CTTCCCCTCCGCACTGCCTG | CACCACTCTGTCGGTTTAGCTG |
HOTAIRM1 | AGCAAAAGCTGCGTTCTGCG | AGCTGTTGATGGGTTCAGGCA |
HOXA-AS2 | CCTGGTGCAAAGTCCCACGC | TTCTCCAAGCCAGGGTCCGG |
LIF-AS1 | GGCACAGGAGCTGACACTTACA | CCCTTGATCCCAGGAGGTGG |
LINC00028 | GTCTTCCCCCACCCCAAGCT | GAGACCCAGTGGCTCATGCC |
LINC00337 | GGGCAGACACAGGGTCTCACT | AGGTCACAAAGCTAGGCCGC |
LINC00346 | AGTGGACAGTCTCAGGTCAGGG | AGTGGACAGTCTCAGGTCAGGG |
LINC00461 | TCCCCAGAAGGGAAGACCCAT | CATTTGATCTCCCTGCGCCAGG |
LINC00467 | CAGCACCGATCCCGACATAGAT | AGGGTCAGCCCAGTTTCAGTC |
LINC00484 | GCTCCACGGCTCTTGACAGG | TCAGGATCTCAGGTGCGCTG |
LINC00515 | GTTGAACGGAGCAGTGATGTGG | GCGTGGAGGTCAGGACTACGGA |
LINC00852 | GGCTAAGGTGGGCATGACCG | AGACAGCACTGAAAGAGCTGCA |
LINC00893 | CAGGCTGTGCTCACACCAAT | GTGACCACGCAGTAATGCAGC |
LINC00908 | TGCAGAGTGGGGTCTCCCTG | AGAAACTCCGTCAGTGCTCCC |
LINC00909 | GCTTGAACCCAGTGGCGGAG | CGCAGCTTAGCTCCCACTTACG |
LINC00917 | TCCCTAGGCCAGGCTGGAGG | GGGTATGCCCTGTGTGACACC |
LINC00921 | GCTTGGAAACCCAGCTAGATGG | TCTCCTAACTACTTCCTGCAGCA |
LINC00996 | GAAGCTGGGAGGAGTCCGCC | GGTCTTGATTGATTCCTGTGTCCC |
LINC01039 | AGCATGGCCCTTGATCTCAGG | TCAGAGATAGCCACACTGGCC |
LINC01088 | TGGATTCCCGGAAAGCCTCG | GCCGTGATGGCAGAGATGGC |
LINC01140 | TTGCTCCCCATCGGTCGCTG | ATCTGTGGGTGACACTGGACC |
LINC01197 | GTGCTAGCGGTGCCCTTGTG | CAGCTTGGATACCGCTTCTTGG |
LINC01320 | AGCCGACATCAGTCTCCAGAG | TACCTTCCGCAGATTAGTTACATG |
LINC01354 | GCCGAGAACACGTCTGGAGC | TCTCAGCAATTTGGGAGACCG |
LINC01365 | GCTTCCTTGCAAGAACCTTCCC | GAATTAGCCACTTGGCTCTGGC |
LINC01391 | GGCAGGTAGCAGCCCACCTC | CGCGCAGTGTGGCTACCGAA |
LINC01563 | GAGAGCAAGCCGGAAGTGCT | CCCCTCAGTCACCGTATTCAG |
LINC01626 | CTCCCCATCATCCCAGTGTG | AGAGTGGAGTGATTCCTAGCACC |
LINC01638 | GCTCACCTCCTCCATCCCATG | GCTGGATGTGGTGGTGTGTAAC |
LINC01881 | CAGTCACAGCATAGGCATGGC | GTGCTCAGCTGAGTCTGCAG |
LINC02158 | ACACTCACCGCGAGGGTCTG | CAGCGCCTCTGTCACTTTCAG |
LINC02278 | GATGTTACCCACCACCACCTCT | TGGGGATTAAGCACTCCATCCC |
LINC02432 | TCATGCCAGGAGAAGCCTCC | ATCAATGCTGGTGGTTGAGGTG |
LINC02502 | CTCTACTGCCTTCCAAGGTTTC | CCCTGGAATCCAGGACAGCC |
LINC02609 | TAAGACACCTGCGGAGCTCG | TGCCGTGCTGTCCTCAGCAG |
LMF1-AS1 | CCCCATCACAGACTGCGCTT | TCTGCCCCGAACTCTCTGGC |
MCF2L-AS1 | CTCTCTGAGCTCTCCTCGCC | CTTGCTACATTGCCCAGGCTC |
MIR100HG | CCCCTCCTCAGGAATGTCTCC | GTTCTAGTGGCAGAAGCTGCAC |
MIR3936HG | TCCACCTGCCTCAGCCTCCC | CTGGGGAGGAGGTGTGCTTC |
MIR99AHG | GGCAACATAACCAAATGAGCCTTC | CTTCCCATTCTGACCTCAGC |
MLIP-AS1 | GAAGCTCAGTCTAAGTGCCTGC | ACTTGAGATTAGCTGCAGAGCC |
PCAT19 | GAGCTCCTCCCTTTCCTCGG | CTTTCCACAGGTGAGGGACC |
PCOLCE-AS1 | CCTCAAGACAGAGGCAGCAGC | TGCAGGACCGCACGGAGAAG |
PGM5-AS1 | TGTGGGGACTGTGGGCAGTG | CCCAGCAGGTTTCAACAGACG |
PROSER2-AS1 | CTGAGTTCAAGCGGTCCTCC | AGCAACCAGCCAGGCAGCAC |
RBMS3-AS3 | CTACCCCACACAAGAGCTGC | AGGAGTTCCGGAATCCACACC |
SEMA3B-AS1 | CACAGGTTGGAGGTGGGAGG | CTTCAGGGCTCCACTCTGCC |
SLC16A1-AS1 | TCCTGAGAGGTCCCATGTGC | CATGTGCCATGTTGGTGTGC |
SNAI3-AS1 | GATCAGGGTGGCTGTTCTTGG | CCTCGTGGTCACAGCTCAGC |
STAM-AS1 | CGTGTCCCTCGGAGAGGCTG | GGGTTGCTAGGAATCACTCACTG |
SVIL-AS1 | TGTTGCACCCTGAAGAGCCTC | GTCTTAGGGACTCAGGGCACC |
TRAF3IP2-AS1 | CTCACACTTGCCTCGCCGAC | ATCTCAGCAGAATGCTCGTGGG |
TTN-AS1 | AGAGGCAGGACTGGCTAGGT | AAGAACTGCCAGAGGAGCCAT |
TUG1 | CATCTCACAAGGCTGCACCAG | CTTAGGTGTCACCACGGTGGT |
XIST | ATGTCAAAAGATCGGCCCAGC | ATTAGCTGGAGCTTGGCCAG |
ZBTB20-AS5 | AGGGAAGGGGAACCTGCTAG | GGGACTTCTCTGTGCTCTGCC |
ZEB1-AS1 | GAAAGGGACGCCTGGTTTCC | CCACCTAGGATCCCACGGTTC |
MBTD1 | GGCATGGCTACCTGTGAGATG | GGCCAAAATGCTTGCCTTCT |
STARD3NL | TTGGTGGGCAATAGCGTTGA | GCAGCACATAGCCAAAAGCC |
ZNF839 | GTACAGCCGCTTGTGAGAAC | CTGGGACTCTCTTTGCAGGG |
JARID2 | ACCAGTCTAAGGGATTAGGACC | TGCTGGGACTATTCGGCTGA |
NRXN3 | AGTGGTGGGCTTATCCTCTAC | CCCTGTTCTATGTGAAGCTGGA |
FAS | TCTGGTTCTTACGTCTGTTGC | CTGTGCAGTCCCTAGCTTTCC |
CALCR | TTACCCGCATACCAAGGAGAA | TGGGCAGAACTGATAGGACAATA |
LASP1 | CGAGAAGAAGCCCTACTGCAA | CTGCCACTACGCTGAAACCT |
DEPDC1 | TTTTGGTCCTGAAGTTACAAGGC | TGGATACCTTCGTGGTAGAGTTT |
SS18L2 | ATCCGCTGTATTGTGGAGTATCA | GCATCTGCAATGGTAGCCAAAT |
CREBBP | CAACCCCAAAAGAGCCAAACT | CCTCGTAGAAGCTCCGACAGT |
MRC2 | CGAGGAGGACCTATGTGCTCT | CGCTCGTCTTTGCCGTAGT |
PIK3C2A | AAATGGGACCAGTAGTTTGCC | GGGTTTGTGCGGTGATTGGTA |
ALAS1 | AGGCCAAGGTCCAACAGACT | TCCTCACGGCATTCATTTCCT |
ETV1 | TGGCAGTTTTTGGTAGCTCTTC | CGGAGTGAACGGCTAAGTTTATC |
BTBD7 | AAAGGAGCTTTCTCTACAAGCC | GCCCCATACTCTGGTGAGGAA |
MAP3K9 | TACCCGCCCATTCAGTTGTTA | CCTCTTGGCGAACATTCTCTATG |
HOXA11 | TGCCAAGTTGTACTTACTACGTC | GTTGGAGGAGTAGGAGTATGTCA |
ISL1 | GCGGAGTGTAATCAGTATTTGGA | GCATTTGATCCCGTACAACCT |
| ShRNA sequences (5’- >3’) |
LINC00909#1 | CCGGGAGGGCTGTCTGGGATTTCTACTCGAGTAGAAATCCCAGACAGCCCTCTTTTTTG |
AATTCAAAAAAGAGGGCTGTCTGGGATTTCTACTCGAGTAGAAATCCCAGACAGCCCTC |
LINC00909#2 | CCGGGCAAGGCGAGAATGCTACTTTCTCGAGAAAGTAGCATTCTCGCCTTGCTTTTTTG |
AATTCAAAAAAGCAAGGCGAGAATGCTACTTTCTCGAGAAAGTAGCATTCTCGCCTTGC |
LINC00909#3 | CCGGCCGATTTCGAGAAATGACTTTCTCGAGAAAGTCATTTCTCGAAATCGGTTTTTTG |
AATTCAAAAAACCGATTTCGAGAAATGACTTTCTCGAGAAAGTCATTTCTCGAAATCGG |
LINC00909#4 | CCGGGACTCTGTAATGGGAAGTTATCTCGAGATAACTTCCCATTACAGAGTCTTTTTTG |
AATTCAAAAAAGACTCTGTAATGGGAAGTTATCTCGAGATAACTTCCCATTACAGAGTC |
LINC00909#5 | CCGGCTTGCTAAAGAGGTTTGACTACTCGAGTAGTCAAACCTCTTTAGCAAGTTTTTTG |
AATTCAAAAAACTTGCTAAAGAGGTTTGACTACTCGAGTAGTCAAACCTCTTTAGCAAG |
MRC2#1 | CCGGCCGGTATTGCTATAAGGTGTTCTCGAGAACACCTTATAGCAATACCGGTTTTTG |
AATTCAAAAACCGGTATTGCTATAAGGTGTTCTCGAGAACACCTTATAGCAATACCGG |
MRC2#2 | CCGGGAAATGAATGAGCAGCAAGAACTCGAGTTCTTGCTGCTCATTCATTTCTTTTTG |
AATTCAAAAAGAAATGAATGAGCAGCAAGAACTCGAGTTCTTGCTGCTCATTCATTTC |
LASP1#1 | CCGGCCAGGACCAGATCAGTAATATCTCGAGATATTACTGATCTGGTCCTGGTTTTTG |
AATTCAAAAACCAGGACCAGATCAGTAATATCTCGAGATATTACTGATCTGGTCCTGG |
LASP1#2 | CCGGGAACTACAAGGGCTACGAGAACTCGAGTTCTCGTAGCCCTTGTAGTTCTTTTTG |
AATTCAAAAAGAACTACAAGGGCTACGAGAACTCGAGTTCTCGTAGCCCTTGTAGTTC |
ZNF839#1 | CCGGGACTTCCGATGGGCTTATCTTCTCGAGAAGATAAGCCCATCGGAAGTCTTTTTTG |
AATTCAAAAAAGACTTCCGATGGGCTTATCTTCTCGAGAAGATAAGCCCATCGGAAGTC |
ZNF839#2 | CCGGGAGCCATGAGTTACTGTCTCACTCGAGTGAGACAGTAACTCATGGCTCTTTTTTG |
AATTCAAAAAAGAGCCATGAGTTACTGTCTCACTCGAGTGAGACAGTAACTCATGGCTC |
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