Research Article

The Oral Delivery of Water-Soluble Phenol TS-13 Ameliorates Granuloma Formation in an In Vivo Model of Tuberculous Granulomatous Inflammation

Table 1

List of forward (F) and reverse (R) primer sequences and TaqMan probes (Pr) used for real-time RT-PCR.

Gene (the encoded protein)GenBank accession numberPrimer sequence

Gapdh (housekeeping gene)NM_001289726.1F: 5-AACTTTGGCATTGTGGAAGGGCTC-3
R: 5-ACCAGTGGATGCAGGGATGATGTT-3
Pr: R6G-5-ATGACCACAGTCCATGCCATCACTGCCA-3-Q
Nfe2l2 (transcription factor Nrf2)NM_010902.4F: 5-TGATGGACTTGGAGTTGC-3
R: 5-TCAAACACTTCTCGACTTACT-3
Pr: Fam-5-TACAGTCCCAGCAGGACATGGATT-3-Q
Nqo1 (NAD(P)H : quinone oxidoreductase 1)NM_008706.5F: 5-CGAATCTGACCTCTATGCTATG-3
R: 5-TAGAGATGACTCGGAAGGATAC-3
Pr: Fam-5-TGAGCTGAAGGACTCGAAGAACT-3-Q
Hmox1 (heme oxygenase 1)NM_010442.2F: 5-AGACCGCCTTCCTGCTCAACATT-3
R: 5TGACGAAGTGACGCCATCTGTGA-3
Pr: Fam-5-TGAGGAGCTGCAGGTGATGCTGACAGAGGA-3-Q
Gstp1 (glutathione S-transferase P1)NM_013541.1F: 5-GATGGAGACCTCACCCTTTA-3
R: 5-CCCATCATTCACCATATCCATC-3
Pr: Fam-5-CTAATGCCATCTTGAGACACCTTGG-3-Q
Rela (nuclear factor κB p65 subunit)NM_009045F: 5-CAGATACCACCAAGACACAC-3
R: 5-ACAAGTTCATGTGGATGAGG-3
Pr: Fam-5-AATGGCTACACAGGACCAGGAACA-3-Q
Nfκb2 (nuclear factor κB p100 subunit)NM_019408.3F: 5-CTTACTCGCCTCCTTCTAAA-3
R: 5-TTTCTTTGGGTATCCCTCTC-3
Pr: Fam-5-ATCCATGCAGAGAATGAGGAGCCT-3-Q
Jun (jun protooncogene, AP-1)NM_010591.2F: 5-ACGGAGAAGAAGCTCACAA-3
R: 5-GTCCTCTGGGTCAGGAAAG-3
Pr: Fam-5-AGGAAATAGGCGAGCGGCTACC-3-Q
Becn1 (beclin 1, autophagy related)NM_019584.3F: 5-AGAGGCTAACTCAGGAGA-3
R: 5-CCGATCAGAGTGAAGCTATTA-3
Pr: Fam-5-AAACTCGCCAGGATGGTGTCTCTC-3-Q
Map1lc3b (microtubule-associated protein 1 light chain 3 beta, LC3B)NM_026160.4F: 5-GAAGTGTACGAGAGTGAGAGAGA-3
R: 5-CAACCATTGGCTTTGTTGGAG-3
Pr: Fam-5-CGCAGGAGACATTCGGGACAGCAA-3-Q
Tfeb (transcription factor EB)NM_011549.3F: 5-CCCTGTCCACTTCCAGTC-3
R: 5-GATACTCCCGAACCTTCTGATG-3
Pr: Fam-5-TCCTACCACCTGCAACAGTCCCA-3-Q
Tfe3 (transcription factor E3)NM_172472.3F: 5-CACACTGAGTCGTCCACCT-3
R: 5-GACAAGTACTGTTTGACCTGCTG-3
Pr: Fam-5-AACCCTACACGCTACCACCTGCA-3-Q