Clinical Study
Pulmonary Bacterial Communities in Surgically Resected Noncystic Fibrosis Bronchiectasis Lungs Are Similar to Those in Cystic Fibrosis
Table 3
Taxonomic classification of all sequences.
| | Taxonomy | Level of resolution | Phylum | Total sequences |
| | Pseudomonas OTU14 | Genus | Proteobacteria | 490 | | Delftia OTU18 | Genus | Proteobacteria | 260 | | Flavobacteriaceae OTU32 | Family | Bacteroidetes | 227 | | Delftia OTU37 | Genus | Proteobacteria | 207 | | Flavobacteriaceae OTU26 | Family | Bacteroidetes | 148 | | Flavobacteriaceae OTU61 | Family | Bacteroidetes | 118 | | Pseudomonas OTU42 | Genus | Proteobacteria | 110 | | Rhizobiaceae OTU1 | Family | Proteobacteria | 102 | | Lysobacter OTU15 | Genus | Proteobacteria | 98 | | Burkholderia OTU24 | Genus | Proteobacteria | 72 | | Pedobacter OTU34 | Genus | Bacteroidetes | 70 | | Brevibacillus OTU62 | Genus | Firmicutes | 66 | | Azospirillum OTU49 | Genus | Proteobacteria | 63 | | Rhizobium OTU53 | Genus | Proteobacteria | 45 | | Pseudomonas OTU43 | Genus | Proteobacteria | 42 | | Sphingomonas OTU17 | Genus | Proteobacteria | 36 | | Staphylococcus OTU47 | Genus | Firmicutes | 25 | | Pseudomonas OTU30 | Genus | Proteobacteria | 23 | | Flavobacterium OTU13 | Genus | Bacteroidetes | 20 | | Phyllobacterium OTU11 | Genus | Proteobacteria | 14 | | Brevundimonas OTU58 | Genus | Proteobacteria | 10 | | Massilia OTU64 | Genus | Proteobacteria | 10 | | Paenibacillaceae OTU35 | Family | Firmicutes | 9 | | Delftia OTU63 | Genus | Proteobacteria | 7 | | Haemophilus OTU44 | Genus | Proteobacteria | 6 | | Pseudomonas OTU39 | Genus | Proteobacteria | 6 | | Delftia OTU8 | Genus | Proteobacteria | 4 | | Flavobacterium OTU4 | Genus | Bacteroidetes | 4 | | Pseudomonas OTU40 | Genus | Proteobacteria | 4 | | Flavobacterium OTU52 | Genus | Bacteroidetes | 3 | | Naxibacter OTU50 | Genus | Proteobacteria | 3 | | Stenotrophomonas OTU12 | Genus | Proteobacteria | 3 | | Brevundimonas OTU38 | Genus | Proteobacteria | 2 | | Methylobacterium OTU19 | Genus | Proteobacteria | 2 | | Pseudomonas OTU60 | Genus | Proteobacteria | 2 | | Rhizobiales OTU16 | Order | Proteobacteria | 2 | | Achromobacter OTU0 | Genus | Proteobacteria | 1 | | Acidovorax OTU59 | Genus | Proteobacteria | 1 | | Acinetobacter OTU5 | Genus | Proteobacteria | 1 | | Acinetobacter OTU56 | Genus | Proteobacteria | 1 | | Acinetobacter OTU7 | Genus | Proteobacteria | 1 | | Anaeromyxobacter OTU20 | Genus | Proteobacteria | 1 | | Bacillaceae OTU54 | Family | Firmicutes | 1 | | Bacillus OTU23 | Genus | Firmicutes | 1 | | Bacteria OTU41 | Domain | Bacteria | 1 | | Bradyrhizobium OTU21 | Genus | Proteobacteria | 1 | | Burkholderia OTU46 | Genus | Proteobacteria | 1 | | Comamonas OTU10 | Genus | Proteobacteria | 1 | | Flavobacteriaceae OTU55 | Family | Bacteroidetes | 1 | | Hydrogenophaga OTU31 | Genus | Proteobacteria | 1 | | Hyphomicrobium OTU33 | Genus | Proteobacteria | 1 | | Massilia OTU28 | Genus | Proteobacteria | 1 | | Methylophilus OTU2 | Genus | Proteobacteria | 1 | | Mycobacterium OTU25 | Genus | Actinobacteria | 1 | | Mycobacterium OTU29 | Genus | Actinobacteria | 1 | | Oxalobacteraceae OTU48 | Family | Proteobacteria | 1 | | Paenibacillaceae OTU3 | Family | Firmicutes | 1 | | Pedobacter OTU51 | Genus | Bacteroidetes | 1 | | Pseudomonas OTU36 | Genus | Proteobacteria | 1 | | Pseudomonas OTU6 | Genus | Proteobacteria | 1 | | Ralstonia OTU22 | Genus | Proteobacteria | 1 | | Rhizobiales OTU9 | Order | Proteobacteria | 1 | | Staphylococcus OTU45 | Genus | Firmicutes | 1 | | Streptococcus OTU57 | Genus | Firmicutes | 1 | | Variovorax OTU27 | Genus | Proteobacteria | 1 |
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OUT: operational taxonomic unit.
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