Stem Cells International / 2016 / Article / Tab 1 / Research Article
Differential Proteomic Analysis of Human Placenta-Derived Mesenchymal Stem Cells Cultured on Normal Tissue Culture Surface and Hyaluronan-Coated Surface Table 1 Structural maintenance and aging-related proteins. H, heavy; L, light.
Category
Protein IDs Protein names
Gene name Normalized ratio Function Reference H/L SC [%] H/L SC [%] H/L SC [%] OTCS :YTCS OCHA :OTCS OCHA :YCHA Structural P20700 Lamin-B1 LMNB1 0.94787 (8.4) 1.1111 (8.9) 0.5203 (7.3) Nuclear structure [19 ] Structural Q8NF91 Nesprin-1 SYNE1 NA 2.5356 (0.4) NA Nuclear maintenance STRING Signal transduction Q01995 Transgelin TAGLN 2.0888 (65.2) 0.6132 (69.2) 1.0023 (51.7) Replicative senescence [20 , 21 ] Protein biosynthesis/degradation P17096 High mobility group protein HMG-I/HMG-Y HMGA1 0.86138 (23.4) 1.6148 (23.4) 1.063 (23.4) Senescence, stemness [22 , 23 ] Cell death O00622 Protein CYR61 CYR61 1.0073 (22) 0.3514 (35.7) NA Senescence, survival [24 –26 ] Protein folding/stress Q9NQ88 Probable fructose-2,6-bisphosphatase TIGAR TIGAR 0.59062 (13) 1.149 (13) 1.42 (13) Senescence, stress-responsive [27 , 28 ] Structural Q13459 Unconventional myosin-IXb MYO9B 0.4769 (1.3) N/A 2.1214 (1.1) Cytoskeletons. Rho-mediated signaling [29 , 30 ] Structural O95747 Serine/threonine- protein kinase OSR1 OXSR1 ND ND 1.6339 (6.5) Cytoskeletons. Stress- responsive, regulates actin [31 ] Signal transduction P61587 Rho-related GTP-binding protein RhoE RND3 1.5923 (10.2) 0.4502 (17.2) ND Cytoskeletons. Stress fiber formation, cell motility, and adhesion [32 –34 ] Structural Q9UHB6 LIM domain and actin-binding protein 1 LIMA1 1.5189 (15.3) 0.4547 (13.0) 0.6461 (7.6) Cytoskeletons [32 ] Signal transduction Q13642 Four and a half LIM domains protein 1 FHL1 3.2279 (24.1) 0.3981 (16.1) 1.2503 (12.7) Cytoskeletons. Cardiac cell differentiation [32 ] Structural O00151 PDZ and LIM domain protein 1 PDLIM1 1.5045 (37.1) 1.2779 (37.7) 1.4622 (27.4) Cytoskeletons [32 ] Structural P07197 Neurofilament medium polypeptide NEFM 2.2981 (5.1) 0.4864 (9.4) ND Cytoskeletons. Protein transport in neuron cells, axonal growth. [35 ] Structural P09493 Tropomyosin alpha-1 chain TPM1 2.2465 (35.2) 0.6003 (26.1) NA Cytoskeletons. Cardiac muscle contraction [36 ] Structural Q14315 Filamin-C FLNC 1.6548 (19.6) 0.5924 (23.4) 1.2207 (15.3) Cytoskeletons. Interacts with actin STRING
Normalized ratio H/L reversed: 1/[H/L]. Sequence coverage %. Not applicable. Not detected. Analyzed by STRING9.1.