Review Article

N6-Methyladenosine in RNA and DNA: An Epitranscriptomic and Epigenetic Player Implicated in Determination of Stem Cell Fate

Table 1

Machinery of adenosine methylation in DNA and RNA.

MachineryComponentRoles in the complexLocalizationOrganismBiological function

Writers for m6dADAMT-1Methylation of DNA adenosineNucleiC. elegans

Erasers for m6dADMADDemethylation of m6dANucleiDrosophila
NMAD-1Demethylation of m6dANucleiC. elegans
ALKBH1Demethylation of m6dA and tRNANuclei/cytoplasmMammals
FTODemethylation of m6dA and RNA m6ANuclei/cytoplasmMammals

Readers for m6dAUnknownUnknown

Writers for m6AMETTL3m6A methyltransferaseNuclei
METTL14Core component of the m6A methyltransferase in humanNuclei
MT-A70ComplexNuclei
WTAPRegulatory component of the complexNuclei
KIAA1429Regulatory component of the complexNuclei

Erasers for m6AALKBH5m6A demethylaseCytoplasmMammalsmRNA export and RNA metabolism
FTOm6A demethylaseCytoplasmMammalsMammal fertility convert m6A to h-m6A, f-m6A

Readers for m6AYTH family
(i) YTHDF1m6A readerCytoplasmMammalsTrigger/enhance translation of mRNA bearing m6A
(ii) YTHDF2m6A readerCytoplasmmRNA decay
Mouse female fertility
cap-independent
Translation in nuclear
(iii) YTHDF3m6A readerCytoplasmMammalsConcordance of YTHDF1 and YTHDF2
(iv) YTHDC1m6A readerNucleiMammalsFacilitate inclusion of alternative exons
(v) YTHDC2m6A readerCytoplasmMammalsFertility of mouse
hnRNP family
(i) hnRNP-A2/B1m6A readerCytoplasmMammalsAlternative splicing processing of miRNA
(ii) hnRNP-Cm6A readerCytoplasmMammalsAlternative splicing processing of miRNA
(iii) hnRNP-Gm6A readerCytoplasmMammals
(iv) hnRNP-H1m6A readerCytoplasmMammals
(v) hnRNP-H2m6A readerCytoplasmMammals
KH/RM/RBD family
(i) FMR1m6A readerCytoplasm/nuclei mammalsFMR1/YTHDF1 share overlapping mRNA targets
(ii) FXR1m6A readerCytoplasm/nuclei
(iii) FXR2m6A readerCytoplasm/nuclei
(iv) KHSRPm6A readerCytoplasm/nuclei

Repellers for RNA m6A(i) G3BP1Repel to m6ACytoplasm/nuclei mammalsPositively affect stability of their target mRNAs
(ii) G3BP2Repel to m6ACytoplasm/nuclei
(iii) CAPRINIRepel to m6ACytoplasm/nuclei
(iv) USP10Repel to m6ACytoplasm/nuclei
(v) METTL16Repel to m6ACytoplasm/nuclei