Construction of Gene Regulatory Networks Using Recurrent Neural Networks and Swarm Intelligence

Table 4

Comparison with contemporary research [46] for the E. coli experiments.

Known interactions	Predictions by
	[13]	[61]	[34]	[46]	[62]	PSO	BAPSO
lexA → lexA	Yes	Yes	No	Yes	Yes	Yes	Yes
lexA → recA	Yes	Yes	Yes	Yes	Yes	Yes	Yes
recA → lexA	Yes	Yes	No	No	No	Yes	Yes
lexA → uvrA	Yes	Yes	Yes	Yes	Yes	Yes	Yes
lexA → uvrD	No	No	Yes	Yes	Yes	Yes	Yes
lexA → uvrY	No	No	No	Yes	No	Yes	Yes
lexA → umuD	No	Yes	Yes	Yes	Yes	Yes	Yes
lexA → ruvA	No	No	No	Yes	No	Yes	Yes
lexA → polB	No	No	Yes	Yes	Yes	Yes	Yes
Spurious edges (FP)	5	10	2	5	3	10	9
Precision (PPV)	0.44	0.33	0.71	0.62	0.70	0.47	0.44