Prediction of G Protein-Coupled Receptors with SVM-Prot Features and Random Forest

Table 6

Human top 10 conserved motifs of GPCR sequences found by the MEME system.

Motif	Width	-value	Best possible match
1	40		KMACTIMAMFLHYFYLAAFFWMLIEGLHLYLMAVMVWHHE
2	29		VMHYLFTIFNSFQGFFIFIFHCLLNRQVR
3	41		CLDRPIPPCRSLCERARQGCEPLMNKFGFPWPEMMKCDKFP
4	50		VITWVGIIISLVCLLICIFTFLFCRAIQNTRTSIHKNLCICLFLAHLLFL
5	21		NKTHTTCRCNHLTNFAVLMAH
6	29		GTDKRCWLHLDKGFIWSFIGPVCVIILVN
7	50		IFFIITLWIMKRHLSSLNPEVSTLQNTRMWAFKAFAQLFILGCTWCFGIL
8	29		LQVHQWYPLVKKQCHPDLKFFLCSMYAPV
9	29		CQPIDIPLCHDIGYNQMIMPNLLNHETQE
10	50		MKHDGTKTEKLEKLMIRIGVFSVLYTVPATIVIACYFYEQAFRDHWERTW