Ecotype-Level Genetic Biodiversity of Five Italian Traditional Crops
Table 6
Genetic indices calculated for the SSR pattern.
Ecotype
Locus
N
Na
Ne
I
Ho
He
UHe
F
Gene diversity
PIC
Cilentano
1906
9
3
1.26
0.43
0.11
0.2
0.22
0.45
0.2
0.19
4307
10
2
1.22
0.33
0.2
0.18
0.19
−0.11
0.18
0.16
4399
10
1
1
0
0
0
0
NA
0
0
4782
10
2
1.22
0.33
0
0.18
0.19
1
0.18
0.16
4991
10
4
2.9
1.17
0.9
0.66
0.69
−0.37
0.66
0.59
5739
6
1
1
0
0
0
0
NA
0
0
5800
8
5
4.41
1.54
0.75
0.77
0.83
0.03
0.77
0.74
Mean value
9
3
1.86
0.54
0.28
0.28
0.3
NA
0.28
0.26
San Pasquale
1906
10
4
3.45
1.3
1
0.71
0.75
−0.41
0.71
0.66
4307
10
1
1
0
0
0
0
NA
0
0
4399
10
1
1
0
0
0
0
NA
0
0
4782
10
2
1.47
0.5
0.2
0.32
0.34
0.38
0.32
0.27
4991
10
4
2.82
1.16
0.9
0.65
0.68
−0.4
0.65
0.59
5739
9
1
1
0
0
0
0
NA
0
0
5800
10
4
2.44
1.02
1
0.59
0.62
−0.69
0.59
0.5
Mean value
10
2
1.88
0.57
0.44
0.32
0.34
NA
0.32
0.29
N = number of alleles; Ne = number of effective alleles; I = Shannon Index; Ho = observed heterozygosity; He = expected heterozygosity; UHe = unbiased expected heterozygosity; F = Fixation Index; PIC = polymorphic index content.
