Assessing the Effect of SNPs on Litter Traits in Pigs

Table 3

Frequency of alleles and genotypes.

SNP	Genotype						Allele
	AA		AB		BB		A	B
	n	%	n	%	n	%
LW (n = 502)
SNP_1	25	4.98	216	43.03	261	51.99	0.26	0.74
SNP_2	80	15.94	201	40.04	221	44.02	0.36	0.64
SNP_3	10	1.99	141	28.09	351	69.92	0.16	0.84
SNP_4	15	2.99	196	39.04	291	57.97	0.23	0.77
SNP_5	105	20.92	263	52.39	134	26.69	0.47	0.53
SNP_6	0	0.00	0	0.00	502	100.00	0.00	1.00
SNP_7	402	80.08	95	18.92	5	1.00	0.90	0.10
SNP_8	462	92.03	35	6.97	5	1.00	0.96	0.04
SNP_9	151	30.08	276	54.98	75	14.94	0.58	0.42
LN (n = 432)
	AA		AB			BB	A	B
SNP_1	0	0.00	0	0.00	432	100.00	0.00	1.00
SNP_2	207	47.92	203	46.99	22	5.09	0.71	0.29
SNP_3	211	48.84	178	41.20	43	9.95	0.69	0.31
SNP_4	34	7.87	199	46.06	199	46.06	0.31	0.69
SNP _5	99	22.92	229	53.01	104	24.07	0.49	0.51
SNP_6	9	2.08	147	34.03	276	63.89	0.19	0.81
SNP_7	0	0.00	60	13.89	372	86.11	0.07	0.93
SNP_8	216	50.00	186	43.06	30	6.94	0.72	0.28
SNP_9	268	62.04	112	25.93	52	12.04	0.75	0.25