Assessing the Effect of SNPs on Litter Traits in Pigs

Table 4

The SNP effects on the litter traits in LW.

Traits	SNP_1	SNP_2	SNP_3	SNP_4	SNP_5	SNP_7	SNP_9
TNB_1	0.665	0.616	0.122	0.239	0.282	0.062	0.204
TNB	0.976	0.189	0.710	0.383	0.100	0.686	0.730
TNB_All	0.902	0.762	0.251	0.911	0.725	0.561	0.755
NBA_1	0.662	0.636	0.108	0.181	0.082	0.312	0.214
NBA	0.765	0.202	0.745	0.264	0.149	0.837	0.733
NBA_All	0.993	0.936	0.306	0.840	0.820	0.501	0.749
BALWT _1	0.620	0.304	0.191	0.033	0.060	0.562	0.551
BALWT	0.034	0.046	0.830	0.434	0.100	0.976	0.074
BALWT _All	0.685	0.695	0.190	0.825	0.743	0.486	0.992
P_All	0.933	0.968	0.129	0.683	0.738	0.425	0.537

. SNP_1: rs80956812; SNP_2: rs81471381; SNP_3: rs80891106; SNP_4: rs81399474; SNP_5: rs81421148; SNP_7: rs81319839; SNP_9: rs80962240. TNB_1: total number born of the first parity; TNB: total number born of the second and subsequent parities; TNB_All: total number born of lifetime sow; NBA_1: total number born alive of the first parity; NBA: total number born alive of the second and subsequent parities; NBA_All: total number born alive of lifetime sow; BALWT_1: litter weight of piglets born alive of the first parity; BALWT: litter weight of piglets born alive of the second and subsequent parities; BALWT_All: litter weight of piglets born alive of lifetime sow; P_All: all parities of lifetime sow.