Research Article

Extensive In Silico Analysis of ATL1 Gene : Discovered Five Mutations That May Cause Hereditary Spastic Paraplegia Type 3A

Table 4

Shows evaluation of residues predicted by Ramachandran server.

Evaluation of residues

Residue [ 17:CYS] (−133.21, −153.02) in allowed region
Residue [ 25:GLN] (−162.85, 100.89) in allowed region
Residue [ 36:ARG] (−124.01, 73.57) in allowed region
Residue [ 58:ALA] (166.51, 154.01) in allowed region
Residue [ 79:SER] (73.74, 30.24) in allowed region
Residue [ 173:ALA] (−95.50, −67.11) in allowed region
Residue [ 176:GLY] (140.69, −38.32) in allowed region
Residue [ 186:GLY] (−78.37, −76.34) in allowed region
Residue [ 211:SER] (−160.66,−165.13) in allowed region
Residue [ 238:GLY] (88.32, −86.88) in allowed region
Residue [ 280:ASP] (52.68, −148.30) in allowed region
Residue [ 342:SER] (−130.57, 59.78) in allowed region
Residue [ 354:LEU] (64.56, −164.16) in allowed region
Residue [ 390:ASP] (−94.22, −161.52) in allowed region
Residue [ 410:ASP] (−110.37, −161.27) in allowed region
Residue [ 448:GLU] (−76.96, −29.27) in allowed region
Residue [ 451:PRO] (−58.25, 176.45) in allowed region
Residue [ 452:ARG] (−125.67, −177.93) in allowed region
Residue [ 496:PRO] (−37.48, 143.81) in allowed region
Residue [ 529:ASN] (−110.72, 55.22) in allowed region
Residue [ 535:LYS] (−165.28, 122.68) in allowed region
Residue [ 536:ASP] (57.02, −165.51) in allowed region
Residue [ 619:SER] (−110.89, −134.13) in allowed region
Residue [ 676:ASP] (54.03, −141.38) in allowed region
Residue [ 702:LEU] (75.96, −14.74) in allowed region
Residue [ 38:ASN] (−26.25, 134.98) in outlier region
Residue [ 64:SER] (173.42, 126.07) in outlier region
Residue [ 172:VAL] (−79.71, −93.88) in outlier region
Residue [ 239:ARG] (−35.14, 148.96) in outlier region
Residue [ 446:ARG] (75.93, 129.75) in outlier region
Residue [ 447:PRO] (−136.52, −173.35) in outlier region
Residue [ 455:THR] (165.16, 175.45) in outlier region
Residue [ 456:THR] (−98.45, 58.74) in outlier region
Number of residues in the favoured region (∼98.0% expected): 633 (95.0%)
Number of residues in the allowed region (∼2.0% expected): 25 (3.8%)
Number of residues in the outlier region: 8 (1.2%)